Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06- 10] 70,122 sequences; 1,119,683,066 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq37685 174 2e-38 >seq37685 Length=54521 Score = 174 bits (192), Expect = 2e-38 Identities = 174/226 (77%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 27407 TGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTG 27466 |||| |||||||| ||||| || || |||||||| || || |||||||||||| | ||| Sbjct 54404 TGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAGTG 54345 Query 27467 ATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGC 27526 | | ||||| ||| ||||||| || || ||||||||||| || ||||| || || |||| Sbjct 54344 ACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAGC 54285 Query 27527 AGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATG 27586 || | || || |||||||| ||||| || || |||| | ||||| | | || || || Sbjct 54284 AGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGTTGTACCTTGTCCGATTACAACA 54225 Query 27587 TCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | ||||||||||| || ||||| ||| |||| || | ||||| Sbjct 54224 TCTAGAAGGAATCCACCCTCCATCTTGTCCTGCGCCTGAGAGGTGG 54179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569810508676640