Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06-
10] 70,122 sequences; 1,119,683,066 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq66667 143 4e-29
>seq66667
Length=814
Score = 143 bits (158), Expect = 4e-29
Identities = 531/820 (65%), Gaps = 18/820 (2%)
Strand=Plus/Minus
Query 13733 CGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCA 13792
||||||||| ||||| |||||| || ||||||||||||| |||||| | |||||||||||
Sbjct 814 CGAGATGTTTGAGCGGCTCCTGCGGTCCATCTACGCCCCCCAGAACATTTACTGCGTCCA 755
Query 13793 CGTGGACTCCAAGTCCGGCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTT 13852
| | || ||||||| | | ||| || ||| |||||||| |||||
Sbjct 754 CATTGATAGCAAGTCCCCAGCTGCCTTCCAGGCGGCCGTGCGGGCCATCGTGGCCTGCTT 695
Query 13853 CCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGT 13912
||| || || |||| ||| ||| | | ||||| || | ||||||| || |
Sbjct 694 CCCCAATGTCTTTGTGGCGAGCCGCCTGGAAAAGGTGGTCTATGCCTCCTGGTCCCGGCT 635
Query 13913 GCAGGCCGACCTCAGCTGCATGTCGGACCTG--GACGCCTCCCCCGTCAAGTGGAGGTAC 13970
|||||||||||||| ||||||| ||||||| | | || |||| ||| | ||
Sbjct 634 GCAGGCCGACCTCAACTGCATGCAGGACCTGTTGCAGAGCCCGGTGTCA--TGGCGCTAT 577
Query 13971 CTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCG 14030
| |||||| || || | || ||||| ||||||||||| |||||||| || ||
Sbjct 576 GTCCTCAACACCTGTGGCACCGATTTCCCTATCAAGACCAACGCCGAGATCGTCCGTGCC 517
Query 14031 CTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAG--AGCGAGGGCATGCCCAACCACAAGC 14088
|||||| ||| || ||||| | ||||| || || | | | | || |||||
Sbjct 516 CTGAAGATGCTGCAGGGGCAGAACAGCATGGAGTCAGAGAAGCCCT--CGGCCCTCAAGC 459
Query 14089 TGCACCGC-ATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGTGGTCAACACCGGC 14147
| | ||| ||| | | |||| |||| | | | | || ||| | |
Sbjct 458 GGGAGCGCTGGCAGTACCA-CCACGAAGTGGGGAAGTTCATC-TCCCGG---ACAGCCAC 404
Query 14148 AGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTTTGCG 14207
|| | || ||||| || | || ||||| || | || ||||| ||| | | |
Sbjct 403 AG--AGAAACTGCCGCCACCCCACAACGCTCCCATGTTCACAGGCAACGCGTACATCGTG 346
Query 14208 GTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGCTCATGCAC 14267
||||| |||| |||||| | |||| | || || | ||| | | || | |
Sbjct 345 GTCACACGGGCCTTCGTGCAGCACGTCTTTGAGAACCCCACCGTGCAGCAGTTCCTCGAG 286
Query 14268 TGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTAC 14327
||| | ||||||| |||||||| || ||||| | |||||||| | | | |||
Sbjct 285 TGGGCCAAGGACACCTACAGCCCTGAGGAGCATGTCTGGGCCACTCTCAACCGCATGCCT 226
Query 14328 GGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGGGCCAAG 14387
|| || || | || ||| | | ||||||| | ||||||||| ||| |
Sbjct 225 GGTGTTCCAGGCGCCATGCCCCAGAATGACAAGTACCAGCTGTCGGACATGAATGCCCTG 166
Query 14388 GTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCCG 14447
| | | ||||||||||| ||| ||||| || | || || || || | |||||
Sbjct 165 CCCCGCCTGGTCAAGTGGCAGTACCTGGAGGGTGACACCAGCAAGGGCGCACCCTACCCA 106
Query 14448 CCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTGG 14507
|| ||| |||| ||| | |||| ||||||||| |||| | |||||| || |||
Sbjct 105 CCCTGCACCGGCCGGCACCAGCGCGCCGTCTGCATCTACGGGGCGGGCGACCTGCCCTGG 46
Query 14508 CTG-AAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGAC 14546
|| ||| | | ||||| || |||||||||||||||
Sbjct 45 ATGCTCCAGCAGCAC-CACCTCTTGGCCAACAAGTTCGAC 7
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658161798622720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |