Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06- 10] 70,122 sequences; 1,119,683,066 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq37685 159 8e-34 >seq37685 Length=54521 Score = 159 bits (176), Expect = 8e-34 Identities = 162/211 (77%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||| || || ||||| || || | |||||| ||||| | | ||| | |||||| Sbjct 54194 AGGACAAGATGGAGGGTGGATTCCTTCTAGATGTTGTAATCGGACAAGGTACAACCATCT 54253 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || | || || || || |||| |||||||||||| Sbjct 54254 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCC 54313 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || || ||||||||| | |||||||| || ||||| ||| Sbjct 54314 TGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTC 54373 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCA 211113 || || || || ||||| ||||| | ||||| Sbjct 54374 TTGCCAGTCAGGGTCTTCACAAAGATCTGCA 54404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158110573650530