Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06-
10] 70,122 sequences; 1,119,683,066 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq37685 82.4 5e-11
>seq37685
Length=54521
Score = 82.4 bits (90), Expect = 5e-11
Identities = 138/197 (70%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 23612 TGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGG 23671
||||||| || || || ||||| || || || || ||||| || || ||||| ||| |
Sbjct 54404 TGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAGTG 54345
Query 23672 ACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|||| |||| ||| | || | || | | ||||| ||||| | || || |||||
Sbjct 54344 ACACCATTGAGAATGTGAAGGCCAAGA-TCCAGGACAAGGAAGGCATTCCCCCCGATCAG 54286
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | | || ||||| ||||| || |||||||| | | || || ||||||||||
Sbjct 54285 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGTTGTACCTTGTCCGATTACAAC 54226
Query 23791 ATACAAAAAGAGTCCAC 23807
|| | || || |||||
Sbjct 54225 ATCTAGAAGGAATCCAC 54209
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337720732981976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |