Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06- 10] 70,122 sequences; 1,119,683,066 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq37685 82.4 5e-11 >seq37685 Length=54521 Score = 82.4 bits (90), Expect = 5e-11 Identities = 138/197 (70%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 23612 TGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGG 23671 ||||||| || || || ||||| || || || || ||||| || || ||||| ||| | Sbjct 54404 TGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAGTG 54345 Query 23672 ACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||| |||| ||| | || | || | | ||||| ||||| | || || ||||| Sbjct 54344 ACACCATTGAGAATGTGAAGGCCAAGA-TCCAGGACAAGGAAGGCATTCCCCCCGATCAG 54286 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| ||||| || |||||||| | | || || |||||||||| Sbjct 54285 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGTTGTACCTTGTCCGATTACAAC 54226 Query 23791 ATACAAAAAGAGTCCAC 23807 || | || || ||||| Sbjct 54225 ATCTAGAAGGAATCCAC 54209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337720732981976