Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06-
10] 70,122 sequences; 1,119,683,066 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq19977 156 3e-33
seq15741 111 1e-19
>seq19977
Length=118669
Score = 156 bits (172), Expect = 3e-33
Identities = 199/274 (73%), Gaps = 0/274 (0%)
Strand=Plus/Minus
Query 27049 AAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACCCTCCTGTTTATCCTCAGTGTGGGA 27108
|| || |||||||||||||| | | || ||| | | || || ||| |||||
Sbjct 57694 AAGTCTTCTGCCTTAAAGTCACTGATGTCTTCAACCTTACAAAGAATTCTGAGTTTGGGA 57635
Query 27109 AAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACG 27168
|| ||||| ||||| |||| || ||| || || ||||| | |||| |||||| | |
Sbjct 57634 AAAGGTCTTGGCTCTCTCTGAAGTTGAACTTTTAGAGGTTCTAGATGATTCAGGTATATG 57575
Query 27169 TGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATC 27228
||||| ||||| | ||||| | |||||||| || | |||||| ||||| || || |||
Sbjct 57574 TGAGCATCTCCAAATGTGTGTATGAACTCTCCAGGCTTTAGCCCTGTGACATGGGCAATC 57515
Query 27229 ATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCC 27288
|| || ||||| || || |||||||| || || || || || || || ||||| || ||
Sbjct 57514 ATATAGGTGAGCAGTGAATAGCTGGCAATATTGAAAGGCACTCCAAGTCCCATATCTCCA 57455
Query 27289 GACCTCTGGTAGAGCTGACACGAGAGCTCTCCAT 27322
|||||||| |||||||| || || | || ||||
Sbjct 57454 GACCTCTGATAGAGCTGGCAAGATAATTCACCAT 57421
>seq15741
Length=12914
Score = 111 bits (122), Expect = 1e-19
Identities = 138/184 (75%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548
||| || |||| || ||||| ||||||||||| ||||| || || || ||||||| ||
Sbjct 10734 CATATCTTTGTATTCCGCTCCAAAATGCCTCCACTGGAAACCATAAACTGGTCCCAAATC 10793
Query 27549 TCCCTCTTCCCT-GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 27607
||||| || || ||||| ||| ||| ||| |||| || || | || || || || |
Sbjct 10794 CCCCTCCTCTCTGGTGCT-GAAACCCTGCTTATCCAGGAACTCACGTGATCCATTAGCAT 10852
Query 27608 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 27667
|||| ||||| || ||||| | ||||||||||||| ||||| || || || || || |
Sbjct 10853 CCCAAATCTTCACACCCTTTGCAGAGAGCTCTTTGGCATTTGTAGAACC-CT-ACAAAAC 10910
Query 27668 ACAG 27671
||||
Sbjct 10911 ACAG 10914
Score = 82.4 bits (90), Expect = 6e-11
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 27659 TGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGA 27718
||| |||||||||||||||||||| || | ||||| ||||||||||||||||| || |
Sbjct 12160 TGATGAACCACAGCAGCTCCTCCAGCACTCCTTTCCAGAAGACCCTCTTGGTCGTTAGCA 12219
Query 27719 GGGGAAACTG 27728
| ||||||||
Sbjct 12220 GTGGAAACTG 12229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369191414758982
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |