Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06- 10] 70,122 sequences; 1,119,683,066 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq37685 116 9e-21 >seq37685 Length=54521 Score = 116 bits (128), Expect = 9e-21 Identities = 155/214 (72%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||||||||| || || || || || | |||||||||||||| || || | |||||| Sbjct 54194 AGGACAAGATGGAGGGTGGATTCCTTCTAGATGTTGTAATCGGACAAGGTACAACCATCT 54253 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| ||||||||||| || | | || |||||||| || Sbjct 54254 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCC 54313 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || || ||| |||| | | |||| ||| ||| || ||||| || || Sbjct 54314 TGGATCTTGGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCAACCTCAAGGGTGATG 54370 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCA 152103 || ||||| || || |||||||| |||| ||||| Sbjct 54371 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCA 54404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152784163403862