Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06- 10] 70,122 sequences; 1,119,683,066 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq32638 107 2e-18 >seq32638 Length=16397 Score = 107 bits (118), Expect = 2e-18 Identities = 101/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||| ||||| || | ||| |||||||| || | || |||||||| |||| ||| || Sbjct 13468 TCATCTCTACTGATGAGTTCGTTAGAAAAAGTGAGCCCAGGCATTAAGCCTCTTTTCTTC 13527 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | ||||||||||| |||||||| || |||||||| || || || || |||||||| || Sbjct 13528 AGCCAAAATATTGATGCAAATGAGCCAGAAAAGAAGATTCCTTCCACTGCCGCAAAAGCT 13587 Query 23653 ACAAGACGT 23661 || | |||| Sbjct 13588 ACTACACGT 13596 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 23764 TCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTT 23823 |||| | |||| | || || || ||||| || | ||| |||||||||||||| || ||| Sbjct 15601 TCTTTAGAATCTTTAATGTAGGTGTCAATAAGAAGACTGTACATTTCAGAATGTATGTTT 15660 Query 23824 TCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTC 23861 || || |||||||| || ||||| ||||||| |||||| Sbjct 15661 TCCATGGCAATCTGGAAGCCATAGAAACATCGAGCTTC 15698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521030902730800