Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06- 10] 70,122 sequences; 1,119,683,066 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq37685 116 3e-21 >seq37685 Length=54521 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||||||| | || || || || || ||| ||||| | |||||||||||| Sbjct 54175 CATGCCACCTCTCAGGCGCAGGACAAGATGGAGGGTGGATTCCTTCTAGATGTTGTAATC 54234 Query 44167 GG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 || | || | | | || ||||||||||| || |||||||||| | ||||||||| | Sbjct 54235 GGACAAGGTACAAC-CATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGG 54293 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285 || | |||||||| ||| ||||| ||||| | | |||||||| || | Sbjct 54294 GGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCT 54353 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCA 44336 | ||||| | || || ||||| || || ||||||||||| ||||| |||| Sbjct 54354 CAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCA 54404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359682747929274