Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apaloderma_20vittatum_20[refseq_20GCF_5F000703405.1_202014-06-16] 54,728 sequences; 1,070,836,417 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq25653 132 6e-26 >seq25653 Length=3645 Score = 132 bits (146), Expect = 6e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202 ||||||||| ||||||||||| | |||||||||||| || || |||||| |||| ||| Sbjct 3410 GAACTTCTCAAAGTTCCAGGCGATGTCGTTGCGGCAGACCGGGGACCAGATGATGAACTG 3469 Query 83203 GGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAA 83262 |||| ||| |||| | ||| ||| || ||||| |||||| ||||| Sbjct 3470 CGGGTTAGTCATCAGCGAGGAGGGGTCATCGTGCGGGAAGGGCAGCGCCTCTTTCAGGAA 3529 Query 83263 GGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAGTT 83322 || ||||||||| || || | ||||| ||||| ||||||||||| | | || || Sbjct 3530 GGTGAAGAGCGGGTGCGCGTTCTTCCCGTTCACCTCACACTTCTCGAACATGGTGAAATT 3589 Query 83323 CGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTC 83373 |||| | | || || || ||||| ||||||| ||| ||| ||| |||||| Sbjct 3590 GGGCTTGTACCCCTTGCCGGGACGAACGTGCTCCAGCGAAAGCAGGATCTC 3640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608380322109120