Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apaloderma_20vittatum_20[refseq_20GCF_5F000703405.1_202014-06-16]
54,728 sequences; 1,070,836,417 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq2497 111 1e-19
>seq2497
Length=80144
Score = 111 bits (122), Expect = 1e-19
Identities = 111/144 (77%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461
||||||||||||||||||||||| ||||| |||||||| ||||| | || |||||||||
Sbjct 77340 TATTCTGCTCCAAAATGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCTTCTTCT 77399
Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGC 97521
|| | |||||| ||||||| | | | | |||||||| ||||||||||| | |
Sbjct 77400 CTGGTGCTGAAACCCTGCTTATCCAGAAACTCACGTGATCCATTAGCATCCCAAATCTTC 77459
Query 97522 ACACCAGATGCTGCAAGCTCTTTG 97545
|| || ||| | |||||||||
Sbjct 77460 ACGCCTTTTGCAGAGAGCTCTTTG 77483
Score = 95.1 bits (104), Expect = 8e-15
Identities = 116/156 (74%), Gaps = 2/156 (1%)
Strand=Plus/Plus
Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176
||||||||||| ||||| | || | || |||||||| ||||| || |||||||| |||
Sbjct 74241 GTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAAGGCACTCCT 74300
Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCA-TCACACACATA 97235
||||||||||| | || || ||||| | || || || || | ||| ||| | |||||
Sbjct 74301 AGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAGTTCACCATTCAGA-ACATA 74359
Query 97236 AAACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271
||||| | | |||| || || ||||| |||||
Sbjct 74360 GAACTGGCAAAGGGCATGGCATGGAGGCAAGGCCAT 74395
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346552695938960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |