Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apaloderma_20vittatum_20[refseq_20GCF_5F000703405.1_202014-06-16] 54,728 sequences; 1,070,836,417 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq2497 114 1e-20 >seq2497 Length=80144 Score = 114 bits (126), Expect = 1e-20 Identities = 126/168 (75%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAA 20447 |||| | || | ||||| ||||||||||| ||| || ||||| || || ||| || Sbjct 74408 AGATATTTCTCTGATGGCCTTGCCTCCATGCCATGCCCTTTGCCAGTTCTATGTTCTGAA 74349 Query 20448 TAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTT 20507 | |||| |||| || ||| | ||||| | || | ||||||||||| || || ||||| Sbjct 74348 TGGTGAACTGTCTTGCCAACTCTATCAGAGGTCTGGAGATATGGGACTAGGAGTGCCTTT 74289 Query 20508 CAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTAC 20555 ||||||||| || ||| | ||||| || || |||||||| ||||| || Sbjct 74288 CAATATTGCCAGCTATTCACTGCTCACATACATGATTGCCCATGTCAC 74241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398917745269960