Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apaloderma_20vittatum_20[refseq_20GCF_5F000703405.1_202014-06-16] 54,728 sequences; 1,070,836,417 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq29519 93.3 6e-14 >seq29519 Length=205329 Score = 93.3 bits (102), Expect = 6e-14 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480 || ||| |||| || ||||| || || || || ||||||||||||||| ||||| ||| Sbjct 9176 GAGAGAGTGGTTGCCTTCGCTGCAGTCGAAGGAATCTTCTTTTCGGGTTCCTTTGCTGCC 9235 Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGAC 125521 || |||||||| |||||| | || || ||||| |||||||| Sbjct 9236 ATATTTTGGCTGAAGAAGAGGGGCCTGATGCCTGGACTGAC 9276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740552241401280