Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apaloderma_20vittatum_20[refseq_20GCF_5F000703405.1_202014-06-16] 54,728 sequences; 1,070,836,417 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2497 102 2e-16 >seq2497 Length=80144 Score = 102 bits (112), Expect = 2e-16 Identities = 124/167 (74%), Gaps = 4/167 (2%) Strand=Plus/Minus Query 111390 ACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACGT 111449 |||||||| || || || | |||||| || || |||||||||| |||||||||||| Sbjct 77491 ACAAATGCCAAAGAGCTCTCTGCAAAAGGCGTGAAGATTTGGGATGCTAATGGATCACGT 77432 Query 111450 GACTTTCTAGATT--CAGTTGGTCTTGTCGACAACGAAGAAGGTGATCTCGGACCAGTTT 111507 || ||||| ||| ||| ||| | | || |||||||| ||| | |||||||||| Sbjct 77431 GAGTTTCTGGATAAGCAG--GGTTTCAGCACCAGAGAAGAAGGGGATTTGGGACCAGTTT 77374 Query 111508 ACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCAC 111554 | || || || ||| | || ||||| ||||| |||||| |||||| Sbjct 77373 ATGGTTTCCAGTGGAGGCATTTTGGAGCAGAATACAAAGATATGCAC 77327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302439685197296