Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apaloderma_20vittatum_20[refseq_20GCF_5F000703405.1_202014-06-16] 54,728 sequences; 1,070,836,417 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq29519 89.7 6e-13 >seq29519 Length=205329 Score = 89.7 bits (98), Expect = 6e-13 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 126080 ATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATC 126139 || |||||||| ||||| |||||| ||||| || |||| |||||||| ||| || || Sbjct 9294 ATCAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCTTCAGCCAAAATATG 9235 Query 126140 GCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACGCAA 126188 ||| ||| |||||||| ||||||||||| || || ||||| |||| Sbjct 9234 GCAGCAAAGGAACCCGAAAAGAAGATTCCTTCGACTGCAGCGAAGGCAA 9186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596944950402240