Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apaloderma_20vittatum_20[refseq_20GCF_5F000703405.1_202014-06-16] 54,728 sequences; 1,070,836,417 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq40850 93.3 4e-14 seq12710 86.0 6e-12 >seq40850 Length=60012 Score = 93.3 bits (102), Expect = 4e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 153642 TACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTG 153701 |||| ||| || || | || || ||||||||||| ||| ||||| || ||||||||| Sbjct 50330 TACTCCACTATTTCCGTACACAGATTGCTGCATTTGATGGTCCCCAAGTTCTGCTGATTG 50389 Query 153702 CTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTT 153761 || || || ||||| | ||||||| ||| |||||| ||| ||||||||| |||| | Sbjct 50390 CTCTTTCGGTTGCAAGAGTCTTTGTAGACCATGTAGGGTGTGCCGGTCTCTGTCTGCGAT 50449 Query 153762 TCGACGATA 153770 || | |||| Sbjct 50450 TCAATGATA 50458 >seq12710 Length=3026 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| || |||||||||||| | ||| ||| || || || || || |||| | Sbjct 2498 GATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGCCCATCTTCCAGCTGCTTGCCGGCA 2557 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| ||||| || || || ||||| ||||| ||| || || | Sbjct 2558 AAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACA 2617 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | | ||||||||| | || | || || || ||||| || || Sbjct 2618 TTCTCAATGGTGTCACTAGGCTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTC 2677 Query 138601 ACAAAAATCTGCATG 138615 ||||| ||||||||| Sbjct 2678 ACAAAGATCTGCATG 2692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495922906892160