Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apaloderma_20vittatum_20[refseq_20GCF_5F000703405.1_202014-06-16] 54,728 sequences; 1,070,836,417 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq24399 107 2e-17 >seq24399 Length=19255 Score = 107 bits (118), Expect = 2e-17 Identities = 112/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| | || || | ||||| ||||| ||||| |||||||| || || || ||||| Sbjct 18117 GTTACTAACGCTGTGGTGACTGTGCCAGCCTATTTCAATGACTCTCAGCGCCAGGCTACA 18058 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 |||||||||||| ||||| || || || || || || ||||||||||| || || ||| Sbjct 18057 AAAGATGCTGGAACCATTGCAGGCCTCAACGTGCTGCGAATTATCAATGAGCCAACAGCT 17998 Query 550511 GCTGCACTTGCATATGGACTTGATAAA 550537 ||||| | || ||||| || || ||| Sbjct 17997 GCTGCCATAGCCTATGGTCTGGACAAA 17971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4026401736536720