Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apaloderma_20vittatum_20[refseq_20GCF_5F000703405.1_202014-06-16] 54,728 sequences; 1,070,836,417 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq40850 96.9 3e-15 >seq40850 Length=60012 Score = 96.9 bits (106), Expect = 3e-15 Identities = 86/105 (82%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 151334 ACTATTTCCGCACACAAATTGCTGCATTTTATCAATCCGCAATTACTT-TGATTGCTTTT 151392 |||||||||| ||||| |||||||||||| || ||| ||| | || |||||||| || Sbjct 50336 ACTATTTCCGTACACAGATTGCTGCATTTGATGG-TCCCCAAGTTCTGCTGATTGCTCTT 50394 Query 151393 GCGGTTGCAAGCGTCCTTGTATAACATGTACGGTGTGCCGGTTTC 151437 |||||||||| ||| ||||| | |||||| ||||||||||| || Sbjct 50395 TCGGTTGCAAGAGTCTTTGTAGACCATGTAGGGTGTGCCGGTCTC 50439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488209787049600