Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apaloderma_20vittatum_20[refseq_20GCF_5F000703405.1_202014-06-16]
54,728 sequences; 1,070,836,417 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq6505 100 2e-16
>seq6505
Length=959
Score = 100 bits (110), Expect = 2e-16
Identities = 164/234 (70%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| ||||| || |||| ||| | || || ||| ||||| || ||||| ||||| ||
Sbjct 495 GCCACCTCTCAGGCGCAGCACGAGGTGCAGGGTGGATTCCTTCTGGATGTTGTAATCAGA 436
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || || | ||||| || || || |||||||| || | | ||| ||||| || ||
Sbjct 435 CAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGG 376
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCA 34657
| || |||||||| |||||| | || || | ||| ||||| | |||||
Sbjct 375 AATGCCTTCCTTGTCCTGGATCTTG-GCCTTCACATTCTCAATGGTGTCACTGGGCTCCA 317
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711
| || | ||| || || || || || | || |||||||| |||||||||||||
Sbjct 316 CCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTTGA 263
Score = 84.2 bits (92), Expect = 1e-11
Identities = 158/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || || |||| ||| | || || ||| ||||| || ||||| || || ||
Sbjct 723 GCCACCCCTCAGGCGCAGCACGAGGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGA 664
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || || | ||||| || || || |||||||| || | | ||| ||||| || ||
Sbjct 663 CAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGG 604
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| ||||||||||| |||| || | || || | ||| ||||| | ||| |
Sbjct 603 AATCCCCTCCTTGTCCTGGATC-TTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCTA 545
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
| || | ||| || || || || || || || || || ||||||||||||
Sbjct 544 CCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAAATCTGCATG 495
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314519676143624
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |