Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aptenodytes_20forsteri_20[refseq_20GCF_5F000699145.1_202014-06-06] 10,672 sequences; 1,254,347,440 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq2171 102 6e-17 >seq2171 Length=8303823 Score = 102 bits (112), Expect = 6e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 |||||||||||||| |||||||| ||||| |||||||| ||||| | || || || ||| Sbjct 7513595 TATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCTCCTCT 7513536 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGC 97521 || | |||||| ||||||| | || | |||||||| ||||||||||| | | Sbjct 7513535 CTGGTGCTGAAACCCTGCTTATCCAGGAAGTCACGTGATCCATTAGCATCCCAAATCTTC 7513476 Query 97522 ACACCAGATGCTGCAAGCTCTTTG 97545 ||||| ||| | ||||||||| Sbjct 7513475 ACACCCTTTGCAGAGAGCTCTTTG 7513452 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 ||||||||||| ||||| | || | || |||||||| ||||| || |||||||| ||| Sbjct 7516952 GTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAAGGCACTCCT 7516893 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 ||||||||||| | || || ||||| | || || || || | |||| ||||| Sbjct 7516892 AGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAGTTCACCATTTAGAACATAG 7516833 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 ||||| | | |||| || || ||||| ||||| Sbjct 7516832 AACTGGCAAAGGGCATGGCATGGAGGCAAAGCCAT 7516798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346738895539040