Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aptenodytes_20forsteri_20[refseq_20GCF_5F000699145.1_202014-06-06] 10,672 sequences; 1,254,347,440 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq2171 91.5 1e-13 >seq2171 Length=8303823 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || || || ||||| |||| ||| || || | || |||||||||||||| || ||||| Sbjct 7516958 AGCCCTGTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAAGGC 7516899 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACC 20349 ||||| | ||||| ||||| ||||||||||| || || || || || ||||| Sbjct 7516898 ACTCCTAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAGTTCACC 7516846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441313920868480