Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aptenodytes_20forsteri_20[refseq_20GCF_5F000699145.1_202014-06-06] 10,672 sequences; 1,254,347,440 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1613 100 1e-15 seq1510 89.7 2e-12 >seq1613 Length=2230518 Score = 100 bits (110), Expect = 1e-15 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 |||||| |||| ||| | ||||| || || ||||||||||| | || || || || || Sbjct 605855 GTTACTAATGCTGTAGTGACTGTACCAGCCTATTTCAATGACTCTCAGCGCCAGGCTACA 605796 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 |||||||| ||| ||||| || | ||||| || |||||||| || || || ||||| Sbjct 605795 AAAGATGCTGGAACCATTGCAGGGCTCAATGTACTGCGAATTATCAACGAGCCGACAGCT 605736 Query 451433 GCTGCTCTAGCATATGGACT 451452 ||||| |||| ||||| || Sbjct 605735 GCTGCAATAGCCTATGGTCT 605716 >seq1510 Length=3490268 Score = 89.7 bits (98), Expect = 2e-12 Identities = 98/129 (76%), Gaps = 6/129 (5%) Strand=Plus/Plus Query 451168 TTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGA 451227 |||||| | ||| | ||| |||| |||||| |||||||||| || | ||||| Sbjct 599 TTCTTAGGTTGTTGAAAAG---AAAGCCAAGCCCCATATTCAAGTCGATGTTGGAGGTGG 655 Query 451228 A---ACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGA 451284 | || ||||| |||||||||||||||||||| ||||||| || || || ||||| || Sbjct 656 ACAGACAAAAACATTTGCTCCTGAAGAAATTTCTGCTATGGTCCTGACAAAGATGAAGGA 715 Query 451285 AACAGCAGA 451293 ||| ||||| Sbjct 716 AACTGCAGA 724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975448250144576