Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aptenodytes_20forsteri_20[refseq_20GCF_5F000699145.1_202014-06-06] 10,672 sequences; 1,254,347,440 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1613 109 4e-18 >seq1613 Length=2230518 Score = 109 bits (120), Expect = 4e-18 Identities = 361/554 (65%), Gaps = 18/554 (3%) Strand=Plus/Plus Query 517610 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 517669 |||||||| || ||||||||||||||||| | | | || || | ||| |||||||| Sbjct 605050 GCACCATAGGCCACAGCTTCATCAGGATTGATGCTCTTGTTCAGCTCTTTGCCATTGAAG 605109 Query 517670 AAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 517728 |||| || |||| ||| | ||| || ||||||| || || ||||| | || || Sbjct 605110 AAATCCTGCAGCAGTT-TCTGAATCTTTGGGATACGAGTAGACCCACCAACCAGCACGAT 605168 Query 517729 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 517788 ||||| | ||| ||||| || ||||| | |||| | | ||||| || || || || Sbjct 605169 GTCATGGATCTGCGATTTGTCTAGTTTGGCATCCCGCAGGGCCTTTTCCACAGGATCCAG 605228 Query 517789 ACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAA--GA-GTGAC 517845 | | |||| ||| | || ||||| || |||||| |||| || ||| Sbjct 605229 GGTGCCACGGAACAGGTCAGCGTTCAGCTCTTCAAAGCGAGCTCTGGTAATGGATGTG-- 605286 Query 517846 ATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAG 517904 || || ||||| || || | | |||||||| |||||| | | || || ||| | Sbjct 605287 --TAGAAGTCAATACCCTCATAGAGAGAATCAATTTCAATACTGGCCTGCGTGCTAGATG 605344 Query 517905 ATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGG----CTTTTGCT 517960 | || | ||| || ||||| || || || || | || | || | | ||| | || Sbjct 605345 ACAGAGTACGCTTTGCACGCTCGCACGCAGTGCGGAGGCGACGAACTGCTCTCTTGTTCT 605404 Query 517961 GATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGA 518020 |||| ||| | || | || | |||||| || ||| | | || | Sbjct 605405 CGCTGAT----GTCTTTCTTGTGCTTGCGCTTGAACTCAGCAATGAAGTGGTTGACCATG 605460 Query 518021 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 518080 || || ||||| ||||| || ||||| | ||| | |||| || | | | || | || Sbjct 605461 CGGTTGTCAAAGTCTTCTCCACCCAAGTGAGTGTCACCTGCAGTGGATTTCACCTCAAAG 605520 Query 518081 AGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATA 518140 | |||||||||| || || || | |||||| ||| ||||| || | ||||| ||| Sbjct 605521 ATGCCATCTTCAATAGTCAGAATTGACACATCAAAGGTACCACCTCCAAGGTCAAAGATA 605580 Query 518141 AGTACATTCATTTC 518154 || |||||| |||| Sbjct 605581 AGAACATTCCTTTC 605594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780292820206432