Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aptenodytes_20forsteri_20[refseq_20GCF_5F000699145.1_202014-06-06] 10,672 sequences; 1,254,347,440 total letters Query= NC_022749.1 Length=39758 Score E Sequences producing significant alignments: (Bits) Value seq7704 183 8e-42 >seq7704 Length=508 Score = 183 bits (202), Expect = 8e-42 Identities = 283/402 (70%), Gaps = 4/402 (1%) Strand=Plus/Minus Query 18644 TGATCACTCGAACCATGCCGACGCTTACTGTTATAAAACATTTCGATGTAATCAAAAATA 18703 ||| || | ||||| || | || ||| ||||||||||| || || || ||||||||| Sbjct 400 TGACCAATGGAACCGTGTCTGCGTTTAGAATTATAAAACATCTCAATATACTCAAAAATA 341 Query 18704 TCACCGCGAGCTTCTTCTCGCGTTCCGTAGATCTTTTTCTTTATCCGTTCACGTTTCAGT 18763 || |||||| |||| | || || || || || || | ||||| || || Sbjct 340 TCTGATTTAGCTTCCTCTCTTGAAAGATATATTTTCTTTTTGATTCTCTCACGCTTTAGC 281 Query 18764 AGCTGGAAAAAACTTTCTGCGACTGCGTTGTCATGACAGTTACCGCGACGGCTCATACTG 18823 | ||| || || ||||| || || || || ||||| || || || || | |||||||||| Sbjct 280 AACTGAAAGAAGCTTTCAGCAACCGCATTATCATGGCAATTGCCTCGTCTGCTCATACTG 221 Query 18824 CCCTCCAGCCCGTGTGAT--TTCAGGAACGACTGCCACTCATAGCTTGTGTACTGACTGC 18881 | || || | |||| || || |||| |||||| |||| || || || ||||||| Sbjct 220 CTTTCAAGAT--TATGATGCTTAAGAAACGCCTGCCATTCATGACTAGTATATTGACTGC 163 Query 18882 CTTGATCAGAATGAACCAGCACCTGCTTTTGAGGATTACGTCGCCACACGGCCATCAGAA 18941 |||| |||||||| | |||||| | || | |||||| | || || ||||||| | Sbjct 162 CTTGGTCAGAATGGATCAGCACTTTATTCTTAGGATTTCTTCTAAGCAAAGCCATCAATA 103 Query 18942 GTGCATTCAGGACAATATCCTTTGTCATCCGGGGCTGCATTGACCAGCCAATAACTTTGC 19001 ||||| || |||| || | || |||| | || |||||||||||||| || || Sbjct 102 ATGCATCTAGTACAAGGTCTGTGGTAATCCTTGACTTCATTGACCAGCCAACGACAAGGC 43 Query 19002 GCGAGAACAGGTCAACAACCACAGCCAGATACAGCCAGCCTT 19043 |||| |||||||||| ||||| || | ||| ||||| |||| Sbjct 42 GCGAAAACAGGTCAATTACCACTGCTAAATATAGCCATCCTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127087892110080