Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aptenodytes_20forsteri_20[refseq_20GCF_5F000699145.1_202014-06-06] 10,672 sequences; 1,254,347,440 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1987 127 2e-24 >seq1987 Length=3461734 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||||| |||||||| | ||| || |||||||| || || ||||| || || | Sbjct 3430323 CCACCCCTCAGGCGCAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 3430382 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || || ||||||||| | |||| || |||||||| || ||| Sbjct 3430383 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGA 3430442 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || ||||| || | || ||||| | || | |||||| | || || Sbjct 3430443 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACC 3430502 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || | || || || |||||||| ||||| || ||||| ||||||||||| Sbjct 3430503 TCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATTTT 3430552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385169096464752