Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aptenodytes_20forsteri_20[refseq_20GCF_5F000699145.1_202014-06-06] 10,672 sequences; 1,254,347,440 total letters Query= NC_023734.1 Length=35725 Score E Sequences producing significant alignments: (Bits) Value seq738 178 3e-40 >seq738 Length=20194 Score = 178 bits (196), Expect = 3e-40 Identities = 316/455 (69%), Gaps = 6/455 (1%) Strand=Plus/Plus Query 31096 CAAGTCAAAGATGCGGTGGCCTACGATGTTGAATGGCGCAAAGATGATGGCGATTGGATA 31155 ||||| | | ||| || || || ||||| |||||||||||||| ||||| | |||||| Sbjct 7038 CAAGTAAGCGGTGCAGTAGCGTATGATGTCGAATGGCGCAAAGACGATGGTAACTGGATA 7097 Query 31156 AAGCTGCCGCGCACGGGCAATATCAGTGCTGAGATTGATGGCATATATAGTGGTAATTAT 31215 || || || || ||||||| | ||| ||| |||| | ||||| ||||| ||| Sbjct 7098 AAAGCACCACGTACAGGCAATAACTCGATTGAAATTAATGGTGTGTATAGCGGTAACTAT 7157 Query 31216 CTTGCGCGTGTCCGTGCTGTCTCTGCGTTTGATGCTGTATCTAAACCGGCGACATCGATG 31275 || |||||||| ||||||||||||||||||| ||||| || || || || ||| Sbjct 7158 CTAGCGCGTGTGGCTGCTGTCTCTGCGTTTGATTTGGTATCAAACTTTGCTACGTCAATG 7217 Query 31276 CTGACTAATATTGTCGGCAAAGTAGGCGCACCGCCAAAGCTGGCA--TCATTAATAGCAA 31333 || ||| | || ||| ||||| ||||||||| || ||| || |||| ||| | Sbjct 7218 CTCACTGCCGTCACTGGTAAATTAGGCACACCGCCAAGCCTTGCAAGTC-TTAA-AGCCA 7275 Query 31334 AAGGCTTGCTATTTGGCATGCAGCTTGATTGGACGTTTAGCGC-AGGATCAGACGACACC 31392 ||| | ||||||| |||||||| || ||| | || || | ||| ||| |||||| Sbjct 7276 CAGGTATTTTATTTGGTATGCAGCTAGACTGG-CTATTTGCTCAAGGCTCAAGCGACACT 7334 Query 31393 GCTTATACCGAGATACAAGTGGCGTCAGCGCCGGATGTTAACGTCGCAACCCTTGGTATG 31452 || || ||||||||||| || ||||| ||| || |||||| | || | Sbjct 7335 AACTACACTGAGATACAAGTAGCTAGTGCGCCCGATACCAATGTCGCACTATTAGGCACT 7394 Query 31453 TTTGCCTACAACACGGACACACATACGATTACTGGCCTACAAGGCAGCTTGTCACAGTCA 31512 | ||| ||| || | || || |||| || |||| || | || | |||| Sbjct 7395 TATGCTTACCCAACTAATACCGCAACAATTAACGGTTTACAGGGTAATTTAACGCAGTAT 7454 Query 31513 TATCGAGGCCGTATCGTCGATAAATTAGGCAATGT 31547 ||||| || |||||||| |||||||| |||||||| Sbjct 7455 TATCGTGGTCGTATCGTTGATAAATTGGGCAATGT 7489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114183927636768