Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aptenodytes_20forsteri_20[refseq_20GCF_5F000699145.1_202014-06-06] 10,672 sequences; 1,254,347,440 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq1987 82.4 6e-11 >seq1987 Length=3461734 Score = 82.4 bits (90), Expect = 6e-11 Identities = 143/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 106256 AAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACC 106315 ||||||||| || ||||| || || ||||||||||||||||| ||| |||| || || Sbjct 3430553 AAAAATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCTTGGAGGTTGAGCC 3430494 Query 106316 CGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGA 106375 | | || | ||| | || || || || ||||| |||||| | ||| || Sbjct 3430493 CAGTGACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGA 3430434 Query 106376 TCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTA 106435 ||| || ||||| || | ||| ||||| || | |||||| || || ||| || Sbjct 3430433 TCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTA 3430374 Query 106436 CAACATACAAAAAGAATCTACACTACAT 106463 |||||| || || ||||| || || ||| Sbjct 3430373 CAACATCCAGAAGGAATCCACCCTGCAT 3430346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402277271000576