Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aptenodytes_20forsteri_20[refseq_20GCF_5F000699145.1_202014-06-06] 10,672 sequences; 1,254,347,440 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq587 100 3e-16 >seq587 Length=418187 Score = 100 bits (110), Expect = 3e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 104888 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947 ||| | ||||| | | ||||| || ||||| || ||||| |||||||| ||||||||| Sbjct 344926 TGGTACGCTATCATTGAATCTCAGACAGAGACCGGCACACCGTACATGCTGTACAAAGAC 344985 Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007 | || |||| ||||| ||||| |||| ||||| ||||| | |||||| ||| Sbjct 344986 TCTTGCAACCGGAAGAGCAATCAGCAGAACTTGGGGACCATCAAATGCAGCAATCTGTGT 345045 Query 105008 ACAGAAATCTTGGAATTTACAGACAAAGATGAG 105040 |||||||| |||| | ||| |||||||||| Sbjct 345046 ACAGAAATAGTGGAGTATACCAGCAAAGATGAG 345078 Score = 82.4 bits (90), Expect = 9e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 105506 AACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAAT 105565 ||||| || ||| | |||| |||||||| || || || || || |||||||| ||||| Sbjct 348950 AACAGCCTTCTCCTTTCTCCCATGCCAACTGCTTCTACTGCTCAGATCTTGGGCAATAAC 349009 Query 105566 GAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTT 105625 |||| | | || |||||||| | |||||||| | ||| |||| ||||||||||| Sbjct 349010 GAATCCATCGAGCCCTACACCAGTAACATCTACACACGCAGAGTCCTCTCGGGAGAGTTT 349069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583182993009280