Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aptenodytes_20forsteri_20[refseq_20GCF_5F000699145.1_202014-06-06] 10,672 sequences; 1,254,347,440 total letters Query= NC_028743.1 Length=48594 Score E Sequences producing significant alignments: (Bits) Value seq738 134 4e-27 >seq738 Length=20194 Score = 134 bits (148), Expect = 4e-27 Identities = 176/241 (73%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 34785 GCGTTTAAATTGCCCGCTACGTTGAGCCAGTTGAATTAAACCTTTGTAGCCAAGTTGGAA 34844 ||| |||||||| ||||||||||| || |||||||| |||||||| |||||||| || || Sbjct 18289 GCGCTTAAATTGACCGCTACGTTGCGCGAGTTGAATAAAACCTTTATAGCCAAGCTGAAA 18348 Query 34845 TTGAGCTTCGGtttttttCTCTTTGCGGTTTTGGTACGGCACAATGTAGGCAAAACCTAA 34904 ||| || || || || ||||| || | | ||||||||||| |||||||||| Sbjct 18349 TTGCGCCTCTGTGCGATTGGCTTTGTTATTGCGAAAAGGCACAATGTAAGCAAAACCTAG 18408 Query 34905 GCCGTTTTGTAAT-GCCAAATTAAGCGTTGCTGCCATACAAGCGGCGTTGAATACGCTCA 34963 | ||| | |||| | | |||||||||||||||||||||||| || | ||||| | Sbjct 18409 GTTGTTAT-TAATCGGTAGATTAAGCGTTGCTGCCATACAAGCTGCACTAAATACAGTTT 18467 Query 34964 TCGGTTCGGCATTGCGTAACATTGAGTTACTATTCACAATCTGCAACACGCTTGTTGTAA 35023 || || ||||| | ||| ||||||||| || | || | ||||| || | || Sbjct 18468 GAGGGTCTGCATTTTTGAGCATATCGTTACTATTAACCACTTGTAGGACGCTGGTAGCAA 18527 Query 35024 A 35024 | Sbjct 18528 A 18528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155359508793984