Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aptenodytes_20forsteri_20[refseq_20GCF_5F000699145.1_202014-06-06] 10,672 sequences; 1,254,347,440 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq2171 100 3e-16 >seq2171 Length=8303823 Score = 100 bits (110), Expect = 3e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 34302 CCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTC 34361 |||| |||||||| | ||| |||||||| ||||| ||| | || || || ||||| | Sbjct 7513451 CCAAAGAGCTCTCTGCAAAGGGTGTGAAGATTTGGGATGCTAATGGATCACGTGACTTCC 7513510 Query 34362 TGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCC 34421 |||| |||| ||| ||| | | |||||||| || ||||| || || || || |||| Sbjct 7513511 TGGATAAGCAGGGTTTCAGCACCAGAGAGGAGGGGGATTTGGGACCAGTTTATGGTTTCC 7513570 Query 34422 AGTGGAGACACTTTGGGGCGGAGTA 34446 ||||||| |||||||| || || || Sbjct 7513571 AGTGGAGGCACTTTGGAGCAGAATA 7513595 Score = 100 bits (110), Expect = 3e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 || || || |||||||| ||||||||||| || || || || ||||| || |||||||| Sbjct 7513595 TATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCTCCTCT 7513536 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 | | ||| ||| |||| ||||| ||||| || || || | ||| ||||| |||||| Sbjct 7513535 CTGGTGCTGAAACCCTGCTTATCCAGGAAGTCACGTGATCCATTAGCATCCCAAATCTTC 7513476 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGG 7043 || ||| | |||||||| |||| Sbjct 7513475 ACACCCTTTGCAGAGAGCTCTTTGG 7513451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448202601795840