Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aptenodytes_20forsteri_20[refseq_20GCF_5F000699145.1_202014-06-06] 10,672 sequences; 1,254,347,440 total letters Query= NC_031098.1 Length=40749 Score E Sequences producing significant alignments: (Bits) Value seq738 86.0 2e-12 >seq738 Length=20194 Score = 86.0 bits (94), Expect = 2e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 16126 CAGGCGGCTACACAGGCAACATGGGCCGTGGTGATGTGGCTGGTGTGGTTCATGGTCAGG 16185 ||||||| ||||| |||||||||||| |||| | ||||| ||||| ||||| | | Sbjct 1430 CAGGCGGTTACACTGGCAACATGGGCGTAAATGATATCGCTGGCGTGGTGCATGGCAAAG 1489 Query 16186 AATATGTACTTAATGCCGCAGCCACTAAACGCGTTGGTGTGGATACATTGAATGCCATTA 16245 | ||||| | || || ||||||||||| || ||||||| |||| | || ||||| | Sbjct 1490 AGTATGTGTTAAACGCGGCAGCCACTAAGCGTATTGGTGTTGATAATCTTAACGCCATGA 1549 Query 16246 AC 16247 || Sbjct 1550 AC 1551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130258690223904