Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq212 93.3 4e-14
seq95 82.4 8e-11
>seq212
Length=4710727
Score = 93.3 bits (102), Expect = 4e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285
|| |||||||| |||||||| || || ||||| || || ||||| || | |||||
Sbjct 4384858 TCATCTCTGCTAATAAGTTCATTAGAGAAAGTCAATCCAGGCATCAGGCCCCTCTTCTTC 4384917
Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344
| ||||||||| |||||||| || ||||||||||| || || ||||| | ||||| ||
Sbjct 4384918 AGCCAGAATATAGCAGCAAAGGAACCCGAAAAGAAGATTCCTTCAACTGCAGCAAAGGC 4384976
>seq95
Length=9561987
Score = 82.4 bits (90), Expect = 8e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531
|| || || ||||| || | ||||||||||||||| ||||| || || ||||| |||||
Sbjct 3108655 ATGTATGTGTCAATTAGAAGACTGTACATTTCTGAATGTATATTTTCCATGGCAATCTGG 3108596
Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTC 16569
|| |||||||| || || || || | || ||||||||
Sbjct 3108595 AAGCCATAGAAACAACGGGCTTCTGTGATCTGTACTTC 3108558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 509325093180960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |