Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq7380 113 3e-20 SEQ43687 107 1e-18 seq326825 98.7 7e-16 >seq7380 Length=34365 Score = 113 bits (124), Expect = 3e-20 Identities = 91/110 (83%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349 ||| || || ||||||| || | |||||||||| |||||||||| || ||||||||||| Sbjct 23559 CTTGAGCTCTCTGCTGAGCACTATATTAATTCTGTCTTTTAAAGGACGATTCTTCTCAGG 23500 Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCTG 4399 ||| || ||||| || ||||||||||| |||| | |||||||||| ||| Sbjct 23499 AATGGAAAACCAGGTTTTTTTACCCATTATCAGTGCATTCTGTTTACCTG 23450 >SEQ43687 Length=778 Score = 107 bits (118), Expect = 1e-18 Identities = 83/99 (84%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 4301 TGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACC 4360 ||||||| || | ||||| |||| |||||||||| || |||||||||||||| || |||| Sbjct 220 TGCTGAGCACTATATTAACTCTGTCTTTTAAAGGACGATTCTTCTCAGGAATGGAAAACC 279 Query 4361 AAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCTG 4399 | || ||||||||||| |||| | |||||||||| ||| Sbjct 280 AGGTTTTTTTACCCATTATCAGTGCATTCTGTTTACCTG 318 >seq326825 Length=37256661 Score = 98.7 bits (108), Expect = 7e-16 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||| ||||||||||| |||||||||||||| || ||||| |||||||| | || || | Sbjct 32817583 CTTTGTATTCTGCTCCAAAATGCCTCCACTGGAAACCATAAACAGGTCCCAAGTCCCCCT 32817642 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | ||||||| | ||||| | ||||| | || | || ||||| |||||||||| Sbjct 32817643 CTTCTCTGTTGCAGAAACCCTGCTTATCCAGGAACTCACGTGACCCATTGGCATCCCAAA 32817702 Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTG 102181 | | ||| || ||| || || |||||| Sbjct 32817703 TCTTCACACCCTTTGCAGAGAGTTCTTTG 32817731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359812258349828