Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq7380 113 3e-20
SEQ43687 107 1e-18
seq326825 98.7 7e-16
>seq7380
Length=34365
Score = 113 bits (124), Expect = 3e-20
Identities = 91/110 (83%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349
||| || || ||||||| || | |||||||||| |||||||||| || |||||||||||
Sbjct 23559 CTTGAGCTCTCTGCTGAGCACTATATTAATTCTGTCTTTTAAAGGACGATTCTTCTCAGG 23500
Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCTG 4399
||| || ||||| || ||||||||||| |||| | |||||||||| |||
Sbjct 23499 AATGGAAAACCAGGTTTTTTTACCCATTATCAGTGCATTCTGTTTACCTG 23450
>SEQ43687
Length=778
Score = 107 bits (118), Expect = 1e-18
Identities = 83/99 (84%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 4301 TGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACC 4360
||||||| || | ||||| |||| |||||||||| || |||||||||||||| || ||||
Sbjct 220 TGCTGAGCACTATATTAACTCTGTCTTTTAAAGGACGATTCTTCTCAGGAATGGAAAACC 279
Query 4361 AAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCTG 4399
| || ||||||||||| |||| | |||||||||| |||
Sbjct 280 AGGTTTTTTTACCCATTATCAGTGCATTCTGTTTACCTG 318
>seq326825
Length=37256661
Score = 98.7 bits (108), Expect = 7e-16
Identities = 111/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092
|||| ||||||||||| |||||||||||||| || ||||| |||||||| | || || |
Sbjct 32817583 CTTTGTATTCTGCTCCAAAATGCCTCCACTGGAAACCATAAACAGGTCCCAAGTCCCCCT 32817642
Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152
| ||||||| | ||||| | ||||| | || | || ||||| ||||||||||
Sbjct 32817643 CTTCTCTGTTGCAGAAACCCTGCTTATCCAGGAACTCACGTGACCCATTGGCATCCCAAA 32817702
Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTG 102181
| | ||| || ||| || || ||||||
Sbjct 32817703 TCTTCACACCCTTTGCAGAGAGTTCTTTG 32817731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359812258349828
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |