Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq2849 354 7e-93
SEQ51698 138 1e-27
>seq2849
Length=1082
Score = 354 bits (392), Expect = 7e-93
Identities = 196/196 (100%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 3466 GTACAGGAAGAGGTTTATACTAAACTGTTACATTGCAAACGTGGTTTCGTGTGCCAAGTG 3525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 905 GTACAGGAAGAGGTTTATACTAAACTGTTACATTGCAAACGTGGTTTCGTGTGCCAAGTG 846
Query 3526 TGAAAACCGATGTTTAATCAAGGCTCTGACGCATTTCTACAACCACGACTCCAAGTGTGT 3585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 845 TGAAAACCGATGTTTAATCAAGGCTCTGACGCATTTCTACAACCACGACTCCAAGTGTGT 786
Query 3586 GGGTGAAGTCATGCATCTTTTAATCAAATCCCAAGATGTGTATAAACCACCAAACTGCCA 3645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 785 GGGTGAAGTCATGCATCTTTTAATCAAATCCCAAGATGTGTATAAACCACCAAACTGCCA 726
Query 3646 AAAAATGAAAACTGTC 3661
||||||||||||||||
Sbjct 725 AAAAATGAAAACTGTC 710
Score = 176 bits (194), Expect = 4e-39
Identities = 97/97 (100%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 3828 ATCGCTGAGGTAATATTTAAAATCATTTTCAAATGATTCACAGTTAATTTGCGACAATAT 3887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 401 ATCGCTGAGGTAATATTTAAAATCATTTTCAAATGATTCACAGTTAATTTGCGACAATAT 342
Query 3888 AATTTTATTTTCACATAAACTAGACGCCTTGTCGTCT 3924
|||||||||||||||||||||||||||||||||||||
Sbjct 341 AATTTTATTTTCACATAAACTAGACGCCTTGTCGTCT 305
Score = 174 bits (192), Expect = 1e-38
Identities = 96/96 (100%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 4142 TTATTAAATTTATATAATCAATGAATTTGGGATCGTCGGTTTTGTACAATATGTTGCCGG 4201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 101 TTATTAAATTTATATAATCAATGAATTTGGGATCGTCGGTTTTGTACAATATGTTGCCGG 42
Query 4202 CATAGTACGCAGCTTCTTCTAGTTCAATTACACCAT 4237
||||||||||||||||||||||||||||||||||||
Sbjct 41 CATAGTACGCAGCTTCTTCTAGTTCAATTACACCAT 6
Score = 172 bits (190), Expect = 5e-38
Identities = 95/95 (100%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 3244 TTCCGGACTGCGATTGTACATGCTGTTAACGGCTCCGCCCACTATTAATGAAATTAAAAA 3303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1077 TTCCGGACTGCGATTGTACATGCTGTTAACGGCTCCGCCCACTATTAATGAAATTAAAAA 1018
Query 3304 TTCCAATTTTAAAAAACGCAGCAAGAGAAACATTT 3338
|||||||||||||||||||||||||||||||||||
Sbjct 1017 TTCCAATTTTAAAAAACGCAGCAAGAGAAACATTT 983
>SEQ51698
Length=101
Score = 138 bits (152), Expect = 1e-27
Identities = 96/113 (85%), Gaps = 17/113 (15%)
Strand=Plus/Minus
Query 1875 ATGAACACGTATAGCTTTATCACAAACTGTATATTTTAAACTGTTAGCGACGTCCTTGGC 1934
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 101 ATGAACACGTATAGCTTTATCACAAACTGTATATTTTAAACTGTTAGCGACGTC------ 48
Query 1935 CACGAACCGGACCTGTTGGTCGCGCTCTAGCACGTACCGCAGGTTGAACGTAT 1987
||||||||||||||||||||||||||||||||||||||||||
Sbjct 47 -----------CCTGTTGGTCGCGCTCTAGCACGTACCGCAGGTTGAACGTAT 6
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426629845084340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |