Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_001731.1
Length=190289
Score E
Sequences producing significant alignments: (Bits) Value
seq2588 122 1e-22
seq9961 105 8e-18
>seq2588
Length=442948
Score = 122 bits (134), Expect = 1e-22
Identities = 126/163 (77%), Gaps = 3/163 (2%)
Strand=Plus/Plus
Query 83380 CTGGGCGTTTTCCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCG 83439
||||||| || |||||| ||||||||||| || ||||| || ||||| ||||||| |||
Sbjct 251322 CTGGGCGCTTACCTGGTAGCCGAACTGGTTGCAGGGGAAGCCCAGCACGACCAGCCGCCG 251381
Query 83440 AGCTCCTAGGCGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCA 83499
| ||| | | |||||||| ||| | ||| ||| | ||||| || ||| | |||||
Sbjct 251382 GGGG--TAGCGGGC-CTGCAGCTGGTTGAGCTGGGTGAAGTCCCGCACGGTGGTGCCTCA 251438
Query 83500 GAGGGACGCTACGTTCTCGATGAGCAAGACCCGGCCCCGTAAG 83542
||| || || |||||||||||||| | || |||||||| |||
Sbjct 251439 GAGCGATGCCACGTTCTCGATGAGGACCACACGGCCCCGGAAG 251481
Score = 118 bits (130), Expect = 1e-21
Identities = 221/312 (71%), Gaps = 16/312 (5%)
Strand=Plus/Plus
Query 83056 GAGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGG-CA-GCGGTGGCTGTACCTG 83113
||||||| || |||||||||||||| || || ||| || |||| ||||||| |
Sbjct 250800 GAGCAGGCGCTGGATGTCGGGCTCCA--GCTGGGCGGTGGGCATGCGGGGGCTGTAGCGC 250857
Query 83114 CGCACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTG 83173
|| | || ||| || | ||||||| |||||||||||||||||||| | |||
Sbjct 250858 CGGAAAGGTTCGCCCTCGGGGCCCACCAGGAACTTCTCGAAGTTCCAGGAGATGTCAGCC 250917
Query 83174 CGGCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCAT-GTCGTC 83232
|| | ||| || ||| | | || | || || ||| ||| |||| | ||||||
Sbjct 250918 CGCCGCACCGGGCTCCACACCACGAAGCGCGGCTCTGTCATGAG-GTGCACCGCGTCGTC 250976
Query 83233 GCTAGGCGCCGGCAGG---GCCTCTCGTAGGAAGGCGAAGAGCGGATG--TGCCCTTGCA 83287
| ||||| |||||| |||| || ||| ||||||||| || || || ||| ||
Sbjct 250977 GGCTGGCGCGGGCAGGTGTGCCT-TC--AGGTAGGCGAAGACAGGGTGGGTGTCCT-GC- 251031
Query 83288 CCGTTGACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGG 83347
||||| |||| |||||||| |||||| | ||||| ||||||||||| ||| || ||
Sbjct 251032 CCGTTCACCTGGCACTTCTGGAAGAGGGTGAAGTTGGGCTCGAAGCCACCCCCTGGGCGC 251091
Query 83348 ACGTGCTTCAGG 83359
|||| ||| |||
Sbjct 251092 ACGTACTTGAGG 251103
>seq9961
Length=233182
Score = 105 bits (116), Expect = 8e-18
Identities = 157/221 (71%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202
|||||||||||||||||||| | ||| || | || ||| || |||||| ||| |||
Sbjct 152228 GAACTTCTCGAAGTTCCAGGAGATGTCATTCCTGCGCACAGGGGACCAGATGATGTACTG 152287
Query 83203 GGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAA 83262
|||| ||| |||| | ||| || || ||||| |||||| | |||
Sbjct 152288 CGGGTTAGTCATCAGCGAGGAGGGGTCATCATGTGGGAAGGGCAGCGCCTCTTTCAAGAA 152347
Query 83263 GGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAG 83320
|| |||||| || || || |||| | |||| || |||||||||||||| | | |||
Sbjct 152348 GGTGAAGAGTGGGTGGGCATCCTTCC--CGTTCACATCGCACTTCTCGAACAAGGTGAAG 152405
Query 83321 TTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGA 83361
|| |||| | |||||||||| ||||| ||||| | ||| ||
Sbjct 152406 TTGGGCTTGTAGCCGTTCCCGGGACGAACGTGTTCCAGCGA 152446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 606309651993120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |