Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq285 113 4e-20
seq511 105 6e-18
>seq285
Length=3013400
Score = 113 bits (124), Expect = 4e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||| | |||| |||||||||||| || ||||| ||||| | ||||| | | ||
Sbjct 2914817 AGCACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGTCCATCT 2914758
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|||||||| ||||| ||| | || || |||||||| || || | ||||||||||||
Sbjct 2914757 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCT 2914698
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||| || || || | | | || |||| |||||| |||| ||| ||||||
Sbjct 2914697 TGGATTTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 2914638
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178
|| || || || || || ||||| || ||||||||
Sbjct 2914637 TTCCCCGTCAAGGTCTTCACAAAGATCTGCATTTT 2914603
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||| | |||| |||||||||||| || ||||| ||||| | ||||| | | ||
Sbjct 2917762 AGCACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGTCCATCT 2917703
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|||||||| ||||| ||| | || || |||||||| || || | ||||||||||||
Sbjct 2917702 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCT 2917643
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||| || || || | | | || |||| |||||| |||| ||| ||||||
Sbjct 2917642 TGGATTTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 2917583
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || | || || ||||| || |||||
Sbjct 2917582 TTCCCTGTCAGGGTCTTCACAAAGATCTGCAT 2917551
>seq511
Length=1428375
Score = 105 bits (116), Expect = 6e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||| | |||| ||||||||||| || ||||| ||||| | |||||| | | ||
Sbjct 1121393 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 1121334
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|||||||| ||||| ||| | || || | |||||| || ||| | ||| ||||||||
Sbjct 1121333 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCC 1121274
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
|||||| || || | | | || || | |||||| || | ||| ||||||
Sbjct 1121273 TGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCGACCTCAAGGGTGATGGTC 1121214
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGAA 21181
||||| || | || || ||||| || ||||| |||||
Sbjct 1121213 TTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTTGAA 1121176
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||| | |||| ||||||||||| || ||||| ||||| | |||||| | | ||
Sbjct 1121621 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 1121562
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|||||||| ||||| ||| | || || | |||||| || ||| | ||| ||||||||
Sbjct 1121561 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCC 1121502
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
|||||| || || | | | || || | |||||| || | ||| ||||||
Sbjct 1121501 TGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 1121442
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
||||| || || || || ||||| || |||||
Sbjct 1121441 TTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1121410
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||| | |||| ||||||||||| || ||||| ||||| | |||||| | | ||
Sbjct 1121849 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 1121790
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|||||||| ||||| ||| | || || | |||||| || ||| | ||| ||||||||
Sbjct 1121789 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCC 1121730
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
|||||| || || | | | || || | |||||| || | ||| ||||||
Sbjct 1121729 TGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 1121670
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
||||| || || || || ||||| || |||||
Sbjct 1121669 TTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1121638
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||| | |||| ||||||||||| || ||||| ||||| | |||||| | | ||
Sbjct 1122077 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 1122018
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|||||||| ||||| ||| | || || | |||||| || ||| | ||| ||||||||
Sbjct 1122017 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCC 1121958
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
|||||| || || | | | || || | |||||| || | ||| ||||||
Sbjct 1121957 TGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 1121898
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
||||| || || || || ||||| || |||||
Sbjct 1121897 TTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1121866
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||| | |||| ||||||||||| || ||||| ||||| | |||||| | | ||
Sbjct 1122305 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 1122246
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|||||||| ||||| ||| | || || | |||||| || ||| | ||| ||||||||
Sbjct 1122245 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCC 1122186
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
|||||| || || | | | || || | |||||| || | ||| ||||||
Sbjct 1122185 TGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 1122126
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
||||| || || || || ||||| || |||||
Sbjct 1122125 TTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1122094
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||| | |||| ||||||||||| || ||||| ||||| | |||||| | | ||
Sbjct 1122533 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 1122474
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|||||||| ||||| ||| | || || | |||||| || ||| | ||| ||||||||
Sbjct 1122473 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCC 1122414
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
|||||| || || | | | || || | |||||| || | ||| ||||||
Sbjct 1122413 TGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 1122354
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
||||| || || || || ||||| || |||||
Sbjct 1122353 TTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1122322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420577250292848
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |