Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq2849 322 4e-83
>seq2849
Length=1082
Score = 322 bits (356), Expect = 4e-83
Identities = 189/196 (96%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 128029 GTACAGGAAGAGGTTTATACTAAACTGTTACATTGCAAACGTGGTTTCGTGTACCAAATG 128088
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct 905 GTACAGGAAGAGGTTTATACTAAACTGTTACATTGCAAACGTGGTTTCGTGTGCCAAGTG 846
Query 128089 TGAAAACCGATGTTTGATCAAGGCTCTGACACATTTTTACAATTACGACTCCAAGTGTGT 128148
||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||||||||
Sbjct 845 TGAAAACCGATGTTTAATCAAGGCTCTGACGCATTTCTACAACCACGACTCCAAGTGTGT 786
Query 128149 GGGTGAAGTCATGCATCTTTTAATCAAATCCCAAGATGTGTATAAACCACCAAACTGCCA 128208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 785 GGGTGAAGTCATGCATCTTTTAATCAAATCCCAAGATGTGTATAAACCACCAAACTGCCA 726
Query 128209 AAAAATGAAAACTGTC 128224
||||||||||||||||
Sbjct 725 AAAAATGAAAACTGTC 710
Score = 163 bits (180), Expect = 2e-35
Identities = 93/95 (98%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 127807 TTCCGGACTGCGATTGTACATGCTGTTAACGGCTCCGCCCACTATTAATGCAATTAAAAA 127866
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1077 TTCCGGACTGCGATTGTACATGCTGTTAACGGCTCCGCCCACTATTAATGAAATTAAAAA 1018
Query 127867 TTCCAATTTTAAAAAACGCAGCAAAAGAAACATTT 127901
|||||||||||||||||||||||| ||||||||||
Sbjct 1017 TTCCAATTTTAAAAAACGCAGCAAGAGAAACATTT 983
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 409160507510792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |