Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq2849 322 4e-83 >seq2849 Length=1082 Score = 322 bits (356), Expect = 4e-83 Identities = 189/196 (96%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 128029 GTACAGGAAGAGGTTTATACTAAACTGTTACATTGCAAACGTGGTTTCGTGTACCAAATG 128088 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct 905 GTACAGGAAGAGGTTTATACTAAACTGTTACATTGCAAACGTGGTTTCGTGTGCCAAGTG 846 Query 128089 TGAAAACCGATGTTTGATCAAGGCTCTGACACATTTTTACAATTACGACTCCAAGTGTGT 128148 ||||||||||||||| |||||||||||||| ||||| ||||| |||||||||||||||| Sbjct 845 TGAAAACCGATGTTTAATCAAGGCTCTGACGCATTTCTACAACCACGACTCCAAGTGTGT 786 Query 128149 GGGTGAAGTCATGCATCTTTTAATCAAATCCCAAGATGTGTATAAACCACCAAACTGCCA 128208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 785 GGGTGAAGTCATGCATCTTTTAATCAAATCCCAAGATGTGTATAAACCACCAAACTGCCA 726 Query 128209 AAAAATGAAAACTGTC 128224 |||||||||||||||| Sbjct 725 AAAAATGAAAACTGTC 710 Score = 163 bits (180), Expect = 2e-35 Identities = 93/95 (98%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 127807 TTCCGGACTGCGATTGTACATGCTGTTAACGGCTCCGCCCACTATTAATGCAATTAAAAA 127866 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1077 TTCCGGACTGCGATTGTACATGCTGTTAACGGCTCCGCCCACTATTAATGAAATTAAAAA 1018 Query 127867 TTCCAATTTTAAAAAACGCAGCAAAAGAAACATTT 127901 |||||||||||||||||||||||| |||||||||| Sbjct 1017 TTCCAATTTTAAAAAACGCAGCAAGAGAAACATTT 983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409160507510792