Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq511 165 8e-36
seq285 145 8e-30
seq95 125 7e-24
>seq511
Length=1428375
Score = 165 bits (182), Expect = 8e-36
Identities = 175/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || || || || || || || ||||| ||||||||| | || ||||| ||
Sbjct 1121179 AACATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCC 1121238
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| ||||| | | | | |||||| || || | ||||| |||||||||||| | ||
Sbjct 1121239 AGCGACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGAT 1121298
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| || || |||| || ||||| |||||||| || | ||||||||| ||||||
Sbjct 1121299 CAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTAC 1121358
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||||||| |||| ||||| || ||| |||| ||||||| |||
Sbjct 1121359 AACATCCAGAAGGAGTCCACCCTGCACCTTGTGCTGCGTCTGAGGGGTGGC 1121409
Score = 163 bits (180), Expect = 3e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || | || ||||| ||||||||| |||| || || ||| |
Sbjct 1121410 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 1121469
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||||| || || | ||||| |||||||||||| | || |||
Sbjct 1121470 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAG 1121529
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| || ||||| |||||||| || | ||||||||| ||||||||||
Sbjct 1121530 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 1121589
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||||| |||| ||||| || ||| |||| ||||||| |||
Sbjct 1121590 ATCCAGAAGGAGTCCACCCTGCACCTTGTGCTGCGTCTGAGGGGTGGC 1121637
Score = 163 bits (180), Expect = 3e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || | || ||||| ||||||||| |||| || || ||| |
Sbjct 1121638 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 1121697
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||||| || || | ||||| |||||||||||| | || |||
Sbjct 1121698 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAG 1121757
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| || ||||| |||||||| || | ||||||||| ||||||||||
Sbjct 1121758 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 1121817
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||||| |||| ||||| || ||| |||| ||||||| |||
Sbjct 1121818 ATCCAGAAGGAGTCCACCCTGCACCTTGTGCTGCGTCTGAGGGGTGGC 1121865
Score = 163 bits (180), Expect = 3e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || | || ||||| ||||||||| |||| || || ||| |
Sbjct 1121866 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 1121925
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||||| || || | ||||| |||||||||||| | || |||
Sbjct 1121926 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAG 1121985
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| || ||||| |||||||| || | ||||||||| ||||||||||
Sbjct 1121986 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 1122045
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||||| |||| ||||| || ||| |||| ||||||| |||
Sbjct 1122046 ATCCAGAAGGAGTCCACCCTGCACCTTGTGCTGCGTCTGAGGGGTGGC 1122093
Score = 163 bits (180), Expect = 3e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || | || ||||| ||||||||| |||| || || ||| |
Sbjct 1122094 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 1122153
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||||| || || | ||||| |||||||||||| | || |||
Sbjct 1122154 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAG 1122213
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| || ||||| |||||||| || | ||||||||| ||||||||||
Sbjct 1122214 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 1122273
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||||| |||| ||||| || ||| |||| ||||||| |||
Sbjct 1122274 ATCCAGAAGGAGTCCACCCTGCACCTTGTGCTGCGTCTGAGGGGTGGC 1122321
Score = 163 bits (180), Expect = 3e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || | || ||||| ||||||||| |||| || || ||| |
Sbjct 1122322 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 1122381
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||||| || || | ||||| |||||||||||| | || |||
Sbjct 1122382 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAG 1122441
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| || ||||| |||||||| || | ||||||||| ||||||||||
Sbjct 1122442 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 1122501
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||||| |||| ||||| || ||| |||| ||||||| |||
Sbjct 1122502 ATCCAGAAGGAGTCCACCCTGCACCTTGTGCTGCGTCTGAGGGGTGGC 1122549
>seq285
Length=3013400
Score = 145 bits (160), Expect = 8e-30
Identities = 172/233 (74%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 40685 GAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAG 40744
|||||||||| || || || || || | ||||| || ||||||||| | || || ||
Sbjct 2914601 GAAAAATGCAGATCTTTGTGAAGACCTTGACGGGGAAGACCATCACCCTGGAGGTTGAGC 2914660
Query 40745 CCACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804
||| |||| | | | | |||||| ||||| | ||||| || ||||| || | |
Sbjct 2914661 CCAGTGACACCATTGAGAATGTCAAGGCCAAAATCCAAGACAAGGAAGGCATTCCTCCAG 2914720
Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864
| ||||| | || |||| || ||||| |||||||| || | ||||||||| ||||
Sbjct 2914721 ATCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTCTCTGACT 2914780
Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||||||||| |||| ||||| || ||| |||| ||||||| |||
Sbjct 2914781 ACAACATCCAGAAGGAGTCCACTCTGCACCTTGTGCTGCGTCTGAGGGGTGGC 2914833
Score = 141 bits (156), Expect = 1e-28
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || || || || || ||||||||| | || || || |||
Sbjct 2917779 ATGCAGATCTTTGTGAAGACCCTGACAGGGAAGACCATCACCCTGGAGGTTGAGCCCAGT 2917838
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||||| || || | |||||||| ||||| ||| | || |||
Sbjct 2917839 GACACCATTGAGAATGTCAAGGCCAAGATCCAAGACAAAGAAGGCATTCCCCCAGATCAG 2917898
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | || |||| || ||||| |||||||| || | ||||||| | ||||||||||
Sbjct 2917899 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCTTGTCCGACTACAAC 2917958
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||| |||| |||||||| ||| |||| ||||||| |||
Sbjct 2917959 ATCCAGAAGGAATCCACCCTGCATCTTGTGCTGCGTCTGAGGGGTGGC 2918006
Score = 136 bits (150), Expect = 4e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || || || || || ||||||||| | || || || |||
Sbjct 2917551 ATGCAGATCTTTGTGAAGACCCTGACAGGGAAGACCATCACCCTGGAGGTTGAGCCCAGT 2917610
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||||| ||||| | ||||| || ||||| || | || |||
Sbjct 2917611 GACACCATTGAGAATGTCAAGGCCAAAATCCAAGACAAGGAAGGCATTCCTCCAGATCAG 2917670
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | || |||| || ||||| |||||||| || | ||||||||| |||||||||
Sbjct 2917671 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTCTCTGACTACAAC 2917730
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||||| |||| ||||| || ||| |||| ||||||| |||
Sbjct 2917731 ATCCAGAAGGAGTCCACTCTGCACCTTGTGCTGCGTCTGAGGGGTGGC 2917778
>seq95
Length=9561987
Score = 125 bits (138), Expect = 7e-24
Identities = 96/114 (84%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635
|||||||||||||| || ||||||||||| || || || |||||||| || |||| |||
Sbjct 3107547 GAGCCGCTGCTGCGGGACAACCCCCGCCGCTTTGTCATCTTCCCCATCCAGTACCACGAC 3107606
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTG 116689
|| |||| |||||||| ||||||||||| || |||||||||| ||| ||||||
Sbjct 3107607 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCCGAAGAGGTG 3107660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 513114349241280
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