Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq326825 116 3e-21 >seq326825 Length=37256661 Score = 116 bits (128), Expect = 3e-21 Identities = 115/148 (78%), Gaps = 8/148 (5%) Strand=Plus/Plus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 ||||||||||||||||||||||| ||||| |||||||||||||| | ||| || |||||| Sbjct 32817588 TATTCTGCTCCAAAATGCCTCCACTGGAAACCATAAACAGGTCCCAAGTCCCCCTCTTCT 32817647 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCT----AGATCCATTTGCATCCCAAAT 97517 || | |||||||| ||||||| |||| || || ||||| ||||||||||| Sbjct 32817648 CTGTTGCAGAAACCCTGCTTATC----CAGGAACTCACGTGACCCATTGGCATCCCAAAT 32817703 Query 97518 GTGCACACCAGATGCTGCAAGCTCTTTG 97545 | |||||| ||| | || |||||| Sbjct 32817704 CTTCACACCCTTTGCAGAGAGTTCTTTG 32817731 Score = 95.1 bits (104), Expect = 8e-15 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 ||||||||||| ||||| | || | || |||||||| ||||| || || ||||| ||| Sbjct 32814038 GTGACATGGGCTATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAGGGCACTCCT 32814097 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 ||||||||||| | || || ||||| | ||| ||||| | | |||| ||||| Sbjct 32814098 AGTCCCATATCTCCAGACCTCTGATAGAGCTGGCAGGACAATTCACCATTTAGAACATAG 32814157 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 ||||||| | |||| || || ||||| ||||| Sbjct 32814158 AACTGACAAAGAGCATGGCAAGGAGGCAAAGCCAT 32814192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345402684335960