Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq511 125 6e-24
>seq511
Length=1428375
Score = 125 bits (138), Expect = 6e-24
Identities = 156/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||| | ||| | || ||||| || || |||||||| || || |||||| |||
Sbjct 1121394 CAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 1121335
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| ||||| || ||||| |||| |||||||||||||| || || ||||||||||||||
Sbjct 1121334 TTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTC 1121275
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
|| || || || | || | |||||| || ||||||||| | ||| | ||
Sbjct 1121274 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCGACCTCAAGGGTGATGGT 1121215
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||||| ||||| || || ||||| |||||||||
Sbjct 1121214 CTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 1121181
Score = 125 bits (138), Expect = 6e-24
Identities = 156/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||| | ||| | || ||||| || || |||||||| ||| || |||||| |||
Sbjct 1121622 CAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATC 1121563
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| ||||| || ||||| |||| |||||||||||||| || || ||||||||||||||
Sbjct 1121562 TTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTC 1121503
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
|| || || || | || | |||||| || ||| ||||||| ||| | ||
Sbjct 1121502 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGT 1121443
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||||| |||| || || ||||| |||||||||
Sbjct 1121442 CTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 1121409
Score = 125 bits (138), Expect = 6e-24
Identities = 156/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||| | ||| | || ||||| || || |||||||| ||| || |||||| |||
Sbjct 1121850 CAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATC 1121791
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| ||||| || ||||| |||| |||||||||||||| || || ||||||||||||||
Sbjct 1121790 TTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTC 1121731
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
|| || || || | || | |||||| || ||| ||||||| ||| | ||
Sbjct 1121730 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGT 1121671
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||||| |||| || || ||||| |||||||||
Sbjct 1121670 CTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 1121637
Score = 125 bits (138), Expect = 6e-24
Identities = 156/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||| | ||| | || ||||| || || |||||||| ||| || |||||| |||
Sbjct 1122078 CAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATC 1122019
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| ||||| || ||||| |||| |||||||||||||| || || ||||||||||||||
Sbjct 1122018 TTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTC 1121959
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
|| || || || | || | |||||| || ||| ||||||| ||| | ||
Sbjct 1121958 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGT 1121899
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||||| |||| || || ||||| |||||||||
Sbjct 1121898 CTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 1121865
Score = 125 bits (138), Expect = 6e-24
Identities = 156/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||| | ||| | || ||||| || || |||||||| ||| || |||||| |||
Sbjct 1122306 CAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATC 1122247
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| ||||| || ||||| |||| |||||||||||||| || || ||||||||||||||
Sbjct 1122246 TTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTC 1122187
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
|| || || || | || | |||||| || ||| ||||||| ||| | ||
Sbjct 1122186 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGT 1122127
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||||| |||| || || ||||| |||||||||
Sbjct 1122126 CTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 1122093
Score = 125 bits (138), Expect = 6e-24
Identities = 156/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||| | ||| | || ||||| || || |||||||| ||| || |||||| |||
Sbjct 1122534 CAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATC 1122475
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| ||||| || ||||| |||| |||||||||||||| || || ||||||||||||||
Sbjct 1122474 TTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTC 1122415
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
|| || || || | || | |||||| || ||| ||||||| ||| | ||
Sbjct 1122414 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGT 1122355
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||||| |||| || || ||||| |||||||||
Sbjct 1122354 CTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 1122321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 432102359700976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |