Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq371 147 4e-30
>seq371
Length=20460901
Score = 147 bits (162), Expect = 4e-30
Identities = 129/161 (80%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 51895 GCATTATGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGTATTTTTCATA 51954
|| ||||||| ||| ||| | |||||||| || |||||||||||||| |||||||||||
Sbjct 849274 GCTTTATGGTGGTATTATGTCTCCAAAGGAATTGAATACTTGGATACAGTATTTTTCATC 849215
Query 51955 CTTAGGAAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTTTACTATGTTT 52014
|| ||||| |||||||| || ||||||| || || || ||||| ||||| || |||||
Sbjct 849214 CTGAGGAAGAAATTTAACCAAATTAGTTTCCTTCATGTCTATCACCATTTCACCATGTTC 849155
Query 52015 ACTCTAGGATGGATAGGTATTAAATGGTTTGCTGGAGGTCA 52055
|| || | ||||| |||||||| ||| |||| || || ||
Sbjct 849154 ACCCTCTGGTGGATTGGTATTAAGTGGGTTGCAGGTGGACA 849114
Score = 107 bits (118), Expect = 4e-18
Identities = 105/133 (79%), Gaps = 2/133 (2%)
Strand=Plus/Minus
Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116
|| ||||||||||||||| | ||| | ||||| ||||| |||||||||| ||||||||
Sbjct 846919 GCTTTTTTTGGAGCTCAGATGAATGCATTTATTCATGTCATTATGTACATGTATTATGGA 846860
Query 52117 ATGGCCGCTTGTGGTCCTATGTT-CAGAAAGTATCTATGGTGGAAACGTTATCTTACTAT 52175
| || || ||||| |||| || |||||| ||||| ||||||||||| || | || ||
Sbjct 846859 TTAGCTGCCTGTGGCCCTAAATTTCAGAAA-TATCTGTGGTGGAAACGATACTTGACCAT 846801
Query 52176 AATGCAGTTGGTA 52188
| | || ||||||
Sbjct 846800 ATTACAATTGGTA 846788
Score = 104 bits (114), Expect = 4e-17
Identities = 110/145 (76%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 52185 GGTACAGTTCCATATAGCTATAGGACATACTGCTATGTCCATTTACATAGATTGCCCGTT 52244
||| ||||||||| | |||| || || || || |||| ||||| || ||||| || ||
Sbjct 846307 GGTGCAGTTCCATGTGACTATTGGCCACACAGCCTTGTCTATTTATATTGATTGTCCTTT 846248
Query 52245 TCCAAAATGGATACAGTGGTCAGTTATTATCTATTCTATTAGTTTCATATTACTGTTTGG 52304
|| |||||||| || ||| || ||| ||||| || | | ||||| || ||||||||
Sbjct 846247 CCCCAAATGGATGCACTGGGGTGTAATTTTCTATGCTGTCACCTTCATTTTCCTGTTTGG 846188
Query 52305 TAACTTCTATTTTAGAACATACAAG 52329
||||||||| | | | |||||||||
Sbjct 846187 TAACTTCTACTATCGGACATACAAG 846163
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 919425217953120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |