Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_002665.1
Length=108873
Score E
Sequences producing significant alignments: (Bits) Value
seq63 423 1e-113
seq326825 116 3e-21
>seq63
Length=14936771
Score = 423 bits (468), Expect = 1e-113
Identities = 695/997 (70%), Gaps = 4/997 (0%)
Strand=Plus/Minus
Query 107628 TACCTCAACATAACCAGAGACTGTGAGCGCTTCAAGGCCCAAAGGAAGTTCATACAGTTC 107687
||||| ||| | || || ||||| ||||||||||| || |||||| |||||
Sbjct 4701498 TACCTGAACCTGACGAGGGACTGCAGCCGCTTCAAGGCGACGCGGCGGTTCATCGAGTTC 4701439
Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747
|| ||||| | || ||| ||||||||||| |||||||| ||||| |||| || ||
Sbjct 4701438 CCGCTGAGCCAGGAGGAGGCCGACTTCCCCATCGCCTACTCCATGGTCATCCACGACAAA 4701379
Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807
|| || | || || ||||| ||||| |||| || ||||| |||||| | ||||| ||
Sbjct 4701378 ATCGAGATGTTCGAGCGGCTCCTGCGGTCCGTCTACGCCCCCCAGAACCTCTACTGCATC 4701319
Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867
||||| || ||||| |||| || ||| | ||||| || ||||| |||||
Sbjct 4701318 CACGTCGACCGCAAGTCGCCAGCCACCTTCCAGGAGGCCGTGCGAGCCATCGCCGCCTGC 4701259
Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927
|||||||| ||||| ||||||| ||| ||||| ||||||||||||||| |
Sbjct 4701258 TTCCCCAACGTCTTTGTGGCCAGCCGCCTGGAGAACGTGGTCTATGCCTCCTGGTCCCGG 4701199
Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTAC 107987
|||| |||||||||||||||||| | ||| ||||||||||| | ||||| ||| |||
Sbjct 4701198 CTGCAGGCTGACCTGAACTGTATGCAGGACCTGCTCCAGAGCCCTGTGCCCTGGCGCTAC 4701139
Query 107988 TTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCC 108047
| || || || || || || ||||||||||| |||||||| |||||||| ||||
Sbjct 4701138 CTCCTCAACACCTGTGGCACCGACTTCCCCATCAAGACCAACGCCGAGATCGTCCGCAAT 4701079
Query 108048 CTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAG-GTACCTTCTGAGTCCaaaaa 108106
|| ||| | || |||| ||||||| || ||||| ||| | ||| | || |||
Sbjct 4701078 CTGAAGGCGCTGCAGGGGCAGAACAGCATCGAGTCCGAGAGGCCCTCGTCTGT-CAAGCG 4701020
Query 108107 aaaTCGCTGGAAATACCGCTATGAGGTGACAGACACACTGTACCCTACCAGCAAGA-TGA 108165
| |||||| | |||| | | || |||||| | | | || | |||| | | ||
Sbjct 4701019 GGAGCGCTGGCAGTACCACCACGAAGTGACACAGTTCATCT-TCCGAACAGCTACACAGA 4700961
Query 108166 AGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTC 108225
| | || || || | | | |||||||||||||| ||||| || | |||||| | |
Sbjct 4700960 AACAGCCGCCGCCGCACAGCTCCCCCATGTTCACAGGCAATGCGTACATCGTGGCCACGC 4700901
Query 108226 GAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGGTTGAATGGGTCA 108285
| | ||| || | || |||| | | ||| | || | | || ||| ||
Sbjct 4700900 GGGGCTTCGTGGAGCACCTCTTCCAGAGCCCCACGGTGCAGCAGTTCTTCGAGTGGTCCA 4700841
Query 108286 AAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCTCCGTGGATGC 108345
| |||||||| |||||||| || ||| |||||||||| || | || || | |||
Sbjct 4700840 AGGACACCTACAGCCCCGAGGAGCACGTCTGGGCCACGCTCAACCGCATGCCTGGCGTGC 4700781
Query 108346 CTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGGC 108405
| || |||| || | || ||||| | |||| ||||||| ||||| ||| | |
Sbjct 4700780 CGGGGGCTGTGCCGCACAACAACAAGTTCGAGCTCTCGGACATGAACGCCATGGCCCGCC 4700721
Query 108406 TCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCTGCT 108465
| |||||||||||||||| ||||| || ||||| ||| || || || | ||||||
Sbjct 4700720 TGGTCAAGTGGCAGTACCTGGAGGGCGACACCAGCAAGGGCGCACCCTACCCGCCCTGCA 4700661
Query 108466 CTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCTCC 108525
| || | || | | | ||| ||||| | || || |||||||||||| |||||| ||||
Sbjct 4700660 CCGGTGTGCACCAGCGCGCCGTCTGCGTCTATGGCGCCGGGGACCTGCCCTGGATGCTCC 4700601
Query 108526 AGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGATAACGTCCTGCAGT 108585
|| | || || |||||||| |||||||| ||||| |||||| || || | | ||||
Sbjct 4700600 AGCAGCACCATCTCTTGGCCAACAAGTTCGACCCCCTGGTGGACGAGGCCGCCATCCAGT 4700541
Query 108586 GCTTAGAAGAGTACCTACGTCATAAGGCCATCTATGG 108622
|| | || | | |||| || || | |||| |||| ||
Sbjct 4700540 GCCTCGAGGTGCACCTGCGCCACAGGGCCCTCTACGG 4700504
>seq326825
Length=37256661
Score = 116 bits (128), Expect = 3e-21
Identities = 219/320 (68%), Gaps = 4/320 (1%)
Strand=Plus/Minus
Query 107711 CTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCT 107770
||||||| |||||||| ||| | ||| || || |||| | ||| || ||||| |
Sbjct 13077773 CTTCCCCGTTGCCTACATCATGACCCTGCATAAGGAGTTTGAGACCTTCGAGCGGCTCTT 13077714
Query 107771 GCGAGCCGTGTA--TGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCA 107828
| || ||||| |||||| | ||| | ||||||||||||||||| |||| | |||
Sbjct 13077713 CAGGGCGGTGTACATGCCCC--AAAACGTCTACTGTGTCCACGTGGACCAGAAGGCACCA 13077656
Query 107829 GAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCC 107888
| | || || ||||||| || | | | |||||||||||| | ||| | |||
Sbjct 13077655 GCCGCCTTTAAGCAGGCGGTGCAGCGCCTGGTGGGCTGCTTCCCCAACGCTTTCCTCGCC 13077596
Query 107889 AGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGT 107948
||| ||| | |||||| || | | | ||| | ||| || ||||| |||||
Sbjct 13077595 TCCAAGATGGAGCGGGTGGTCTACGGCGGCATATCCCGCCTGCGGGCCGACCTCAACTGC 13077536
Query 107949 ATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGACA 108008
||| |||| |||| | | ||||| ||||||||| | || || || ||||||
Sbjct 13077535 ATGAGAGACCTGCTGGCCTCCGCCGTGCCCTGGAAGTACCTGCTCAACACCTGCGGGCAG 13077476
Query 108009 GACTTCCCCATAAAGACCAA 108028
||||||||| | ||||||||
Sbjct 13077475 GACTTCCCCTTGAAGACCAA 13077456
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346881570056472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |