Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq285 93.3 3e-14
seq266184 87.8 1e-12
seq511 87.8 1e-12
>seq285
Length=3013400
Score = 93.3 bits (102), Expect = 3e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| || | ||| || || || || || || ||||||||||| | | || | ||||
Sbjct 2914817 AGCACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGTCCATCT 2914758
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|||| || ||||| ||| |||| || || || ||||| || | ||||||||| ||
Sbjct 2914757 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCT 2914698
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
|||| |||||| | ||| ||||||| |||||| || | ||||||| |
Sbjct 2914697 TGGATTTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 2914638
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTT 18329
|| || ||||| || || ||||| || |||||||||
Sbjct 2914637 TTCCCCGTCAAGGTCTTCACAAAGATCTGCATTTTT 2914602
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182
|| || || ||||| || || ||||||||||||| || || | |||||||| ||
Sbjct 2917981 TGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATCTTCCAGCTGC 2917922
Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGT 18242
||||| ||| |||| || || || ||||| ||| | |||||| || || || |
Sbjct 2917921 TTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCTTTGTCTTGGATCTTG 2917862
Query 18243 TGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTC 18302
|||||| | ||| ||||||| |||||| || | ||||||| | || || |||
Sbjct 2917861 GCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTCCCTGTC 2917802
Query 18303 AATGTTTTTACAAAAATTTGCAT 18325
| || || ||||| || |||||
Sbjct 2917801 AGGGTCTTCACAAAGATCTGCAT 2917779
>seq266184
Length=251
Score = 87.8 bits (96), Expect = 1e-12
Identities = 132/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 18141 TGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGT 18200
|| ||||||||||| | || ||| ||| ||||||||||| || || ||| |||| | |
Sbjct 1 TGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAAT 60
Query 18201 CTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACA 18260
|||||||| || || | |||||||| || ||| | | |||||| | ||| |
Sbjct 61 CTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATA 120
Query 18261 GTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATT 18320
|||||| | || ||| | ||| || | || ||||| || || || || ||||||
Sbjct 121 GTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATT 180
Query 18321 TGCATTTT 18328
||||| ||
Sbjct 181 TGCATCTT 188
>seq511
Length=1428375
Score = 87.8 bits (96), Expect = 1e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| || | ||| || || || || || || ||||||||||| | || || | ||||
Sbjct 1121393 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 1121334
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|||| || ||||| ||| |||| || | || ||||| ||| | ||| ||||| ||
Sbjct 1121333 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCC 1121274
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
|| | |||||| | ||| ||||| | ||||||| |||| ||||||| |
Sbjct 1121273 TGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCGACCTCAAGGGTGATGGTC 1121214
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTAA 18331
||||| |||| || || ||||| || ||||| || ||
Sbjct 1121213 TTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTTGAA 1121176
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| || | ||| || || || || || || ||||||||||||| || || | ||||
Sbjct 1121621 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 1121562
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|||| || ||||| ||| |||| || | || ||||| ||| | ||| ||||| ||
Sbjct 1121561 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCC 1121502
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
|| | |||||| | ||| ||||| | |||||| || | ||||||| |
Sbjct 1121501 TGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 1121442
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||||| ||||| || || ||||| || |||||
Sbjct 1121441 TTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1121410
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| || | ||| || || || || || || ||||||||||||| || || | ||||
Sbjct 1121849 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 1121790
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|||| || ||||| ||| |||| || | || ||||| ||| | ||| ||||| ||
Sbjct 1121789 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCC 1121730
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
|| | |||||| | ||| ||||| | |||||| || | ||||||| |
Sbjct 1121729 TGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 1121670
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||||| ||||| || || ||||| || |||||
Sbjct 1121669 TTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1121638
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| || | ||| || || || || || || ||||||||||||| || || | ||||
Sbjct 1122077 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 1122018
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|||| || ||||| ||| |||| || | || ||||| ||| | ||| ||||| ||
Sbjct 1122017 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCC 1121958
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
|| | |||||| | ||| ||||| | |||||| || | ||||||| |
Sbjct 1121957 TGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 1121898
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||||| ||||| || || ||||| || |||||
Sbjct 1121897 TTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1121866
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| || | ||| || || || || || || ||||||||||||| || || | ||||
Sbjct 1122305 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 1122246
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|||| || ||||| ||| |||| || | || ||||| ||| | ||| ||||| ||
Sbjct 1122245 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCC 1122186
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
|| | |||||| | ||| ||||| | |||||| || | ||||||| |
Sbjct 1122185 TGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 1122126
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||||| ||||| || || ||||| || |||||
Sbjct 1122125 TTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1122094
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| || | ||| || || || || || || ||||||||||||| || || | ||||
Sbjct 1122533 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 1122474
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|||| || ||||| ||| |||| || | || ||||| ||| | ||| ||||| ||
Sbjct 1122473 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCC 1122414
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
|| | |||||| | ||| ||||| | |||||| || | ||||||| |
Sbjct 1122413 TGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 1122354
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||||| ||||| || || ||||| || |||||
Sbjct 1122353 TTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1122322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 377832990814860
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