Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq95 134 1e-26
seq212 107 2e-18
>seq95
Length=9561987
Score = 134 bits (148), Expect = 1e-26
Identities = 110/134 (82%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713
|| |||||||| || |||||||||||||| || | ||| ||||| ||||||| ||| ||
Sbjct 3110865 TCATCTCTACTGATGAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTC 3110806
Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773
| |||||| || | |||||||| ||||||||||| ||||| ||||| |||||||| |||
Sbjct 3110805 AGCCAAAAAATTGATGCAAATGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAGCT 3110746
Query 11774 ACTACTCTTTCTCC 11787
| ||| | ||||||
Sbjct 3110745 ATTACACGTTCTCC 3110732
Score = 82.4 bits (90), Expect = 7e-11
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 11900 TATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAAT 11959
||||| || |||| | ||| |||||||||||||| ||||||||||| || || || ||
Sbjct 3108652 TATGTGTCAATTAGAAGACTGTACATTTCTGAATGTATATTTTCCATGGCAATCTGGAAG 3108593
Query 11960 CCATAGAAACATCGTGCCTCTGAACACTGTACATC 11994
||||||||||| || || |||| |||||| ||
Sbjct 3108592 CCATAGAAACAACGGGCTTCTGTGATCTGTACTTC 3108558
>seq212
Length=4710727
Score = 107 bits (118), Expect = 2e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713
|| ||||| || || ||||||||||| || || ||||| ||||||| || | || ||
Sbjct 4384858 TCATCTCTGCTAATAAGTTCATTAGAGAAAGTCAATCCAGGCATCAGGCCCCTCTTCTTC 4384917
Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773
| ||| |||||||||||||| ||||| |||||||| ||||| || || || ||||| ||
Sbjct 4384918 AGCCAGAATATAGCAGCAAAGGAACCCGAAAAGAAGATTCCTTCAACTGCAGCAAAGGCA 4384977
Query 11774 ACTACTCTTTCTCC 11787
|| || || || ||
Sbjct 4384978 ACCACCCTCTCACC 4384991
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 466610712208320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |