Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq266184 82.4 6e-11 >seq266184 Length=251 Score = 82.4 bits (90), Expect = 6e-11 Identities = 131/185 (71%), Gaps = 6/185 (3%) Strand=Plus/Plus Query 42931 TTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGT 42990 ||||| || ||||| || | |||| |||||||| || || ||||| ||||||| ||| Sbjct 7 TTGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGT 66 Query 42991 TGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCT---TTGACTCTGCCAACTGTG 43047 || || | || | |||||| || || ||| | || | ||||| || ||| ||| Sbjct 67 TGGTCAGGTGGGATACCTTCCTTGTCT-TGA--ATCTTTGACTTGACATTGTCAATAGTG 123 Query 43048 TCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGC 43107 || || || || || | || ||||| || ||||||| ||| || || ||||||||| Sbjct 124 TCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGC 183 Query 43108 ATTTT 43112 || || Sbjct 184 ATCTT 188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379850522412024