Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq266184 82.4 6e-11
>seq266184
Length=251
Score = 82.4 bits (90), Expect = 6e-11
Identities = 131/185 (71%), Gaps = 6/185 (3%)
Strand=Plus/Plus
Query 42931 TTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGT 42990
||||| || ||||| || | |||| |||||||| || || ||||| ||||||| |||
Sbjct 7 TTGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGT 66
Query 42991 TGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCT---TTGACTCTGCCAACTGTG 43047
|| || | || | |||||| || || ||| | || | ||||| || ||| |||
Sbjct 67 TGGTCAGGTGGGATACCTTCCTTGTCT-TGA--ATCTTTGACTTGACATTGTCAATAGTG 123
Query 43048 TCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGC 43107
|| || || || || | || ||||| || ||||||| ||| || || |||||||||
Sbjct 124 TCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGC 183
Query 43108 ATTTT 43112
|| ||
Sbjct 184 ATCTT 188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379850522412024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |