Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq285 89.7 4e-13
seq266184 87.8 1e-12
>seq285
Length=3013400
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194
||||||| |||| | | || | ||| |||||||| || || || |||||||| |||
Sbjct 2918007 TGCCACCCCTCAGACGCAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGG 2917948
Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254
| | | | | ||||| | || |||||||| | |||| | || || || |
Sbjct 2917947 ACAAGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGG 2917888
Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314
|||| ||||||||||| || ||| ||| ||| | || ||||| || || || |
Sbjct 2917887 GAATGCCTTCTTTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAA 2917828
Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
| || | ||| ||||| || |||||||| || || ||||| || |||||
Sbjct 2917827 CCTCCAGGGTGATGGTCTTCCCTGTCAGGGTCTTCACAAAGATCTGCAT 2917779
>seq266184
Length=251
Score = 87.8 bits (96), Expect = 1e-12
Identities = 119/166 (72%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 15201 TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTC 15260
|||| ||||||| ||||| || ||||| | ||||| | ||||||||| ||| || |
Sbjct 23 TTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATAC 82
Query 15261 CTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTA 15320
|||| ||||| ||| || ||| ||| | || || || || | ||| || || |
Sbjct 83 CTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCA 142
Query 15321 AGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366
|||||| || ||||| || | ||| || || ||||||||||| ||
Sbjct 143 GGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 360736561925148
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |