Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq212 107 2e-18
seq95 98.7 9e-16
>seq212
Length=4710727
Score = 107 bits (118), Expect = 2e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 13175 TCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTA 13234
|||||||| || || || || || || || || | || ||||| || || | || ||
Sbjct 4384858 TCATCTCTGCTAATAAGTTCATTAGAGAAAGTCAATCCAGGCATCAGGCCCCTCTTCTTC 4384917
Query 13235 ATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCT 13294
| ||| |||||||||||||| ||||||||||| || |||||||||||||| ||||| ||
Sbjct 4384918 AGCCAGAATATAGCAGCAAAGGAACCCGAAAAGAAGATTCCTTCAACTGCAGCAAAGGCA 4384977
Query 13295 ATCAACCTTTCACC 13308
| || ||| |||||
Sbjct 4384978 ACCACCCTCTCACC 4384991
>seq95
Length=9561987
Score = 98.7 bits (108), Expect = 9e-16
Identities = 95/122 (78%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 13175 TCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTA 13234
||||||||||| || || || || ||||| || || || ||||| | |||| ||| ||
Sbjct 3110865 TCATCTCTACTGATGAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTC 3110806
Query 13235 ATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCT 13294
| |||||| || | ||||| || || ||||| || |||||||| ||||||||||| |||
Sbjct 3110805 AGCCAAAAAATTGATGCAAATGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAGCT 3110746
Query 13295 AT 13296
||
Sbjct 3110745 AT 3110744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429265703900856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |