Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq511 82.4 6e-11 >seq511 Length=1428375 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 || || ||| |||||| || |||||||| |||| || ||| | || ||||||||| Sbjct 1121384 TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGC 1121325 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || || | | || | |||||||||||| || | | ||||||||| || || Sbjct 1121324 TTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTG 1121265 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||||| | | | ||||| ||| | | ||| ||| | || ||||| || || || Sbjct 1121264 GCCTTGACATTCTCAATGGTGTCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTC 1121205 Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726 || || |||||||| |||||||| Sbjct 1121204 AGGGTCTTCACAAAGATCTGCAT 1121182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419573265374828