Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq198 86.0 3e-12
seq82 86.0 3e-12
>seq198
Length=34638458
Score = 86.0 bits (94), Expect = 3e-12
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503
|||||| | ||||||| | |||||||||| ||||||| ||||||||||||| ||
Sbjct 28278706 AAAAAAGCCGCTTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCAC 28278647
Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529
||||| |||||||||||||| ||||
Sbjct 28278646 GCTCTAACCAACTGAGCTAACCGGCC 28278621
>seq82
Length=19255039
Score = 86.0 bits (94), Expect = 3e-12
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
||||||| | |||||||||| ||||||| ||||||||||||| ||||||| |||||
Sbjct 7156210 TTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAA 7156151
Query 11515 CTGAGCTAATGGGCCG 11530
||||||||| |||||
Sbjct 7156150 CTGAGCTAACCGGCCG 7156135
Score = 84.2 bits (92), Expect = 1e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
||||||| | |||||||||| ||||||| ||||||||||||| ||||||| |||||
Sbjct 5116853 TTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAA 5116794
Query 11515 CTGAGCTAATGGGCC 11529
||||||||| ||||
Sbjct 5116793 CTGAGCTAACCGGCC 5116779
Lambda K H
0.639 0.410 0.921
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 260449624002928
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |