Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq95 107 2e-18 >seq95 Length=9561987 Score = 107 bits (118), Expect = 2e-18 Identities = 111/144 (77%), Gaps = 1/144 (1%) Strand=Plus/Minus Query 21490 ATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCC 21549 || || |||| |||| ||||| || | |||||||||||| || | || ||||||||||| Sbjct 3110874 ATTCATACCT-CATCTCTACTGATGAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCC 3110816 Query 21550 TCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGC 21609 ||| || || | |||||| ||||| ||||||| || |||||||| || || || || || Sbjct 3110815 TCTTTTCTTCAGCCAAAAAATTGATGCAAATGAGCCAGAAAAGAAGATTCCTTCCACTGC 3110756 Query 21610 AGCAAATGCAACTAATCGTTCACC 21633 ||||| || | || ||||| || Sbjct 3110755 TGCAAAAGCTATTACACGTTCTCC 3110732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529727799066720