Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq285 98.7 8e-16
seq511 96.9 3e-15
>seq285
Length=3013400
Score = 98.7 bits (108), Expect = 8e-16
Identities = 152/215 (71%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| || | |||||| ||||| ||||| || ||||||||||||| || ||| | ||
Sbjct 2917991 CAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATC 2917932
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| || ||||| ||| | || |||| ||| || || || | ||| ||||||||
Sbjct 2917931 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCTTTGTC 2917872
Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || || ||| || | | | ||||| | |||||| |||| |||||||
Sbjct 2917871 TTGGATCTTGGC--CTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATG 2917814
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || || ||||| || || ||||| ||||||||
Sbjct 2917813 GTCTTCCCTGTCAGGGTCTTCACAAAGATCTGCAT 2917779
Score = 93.3 bits (102), Expect = 3e-14
Identities = 147/210 (70%), Gaps = 8/210 (4%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC----TCCAA 16788
||||| ||||||||||| || ||||||||||| | | ||| |||||| ||||
Sbjct 2914808 TGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGT----GCGTCCATCTTCCAG 2914753
Query 16789 TTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAAT 16848
|| ||||| ||| | || |||| ||| || || ||| | ||| || ||||| ||
Sbjct 2914752 CTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGAT 2914693
Query 16849 TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCC 16908
|| ||| || | | | ||||| | |||||| |||| ||||||||| || ||
Sbjct 2914692 TTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTCCC 2914633
Query 16909 GGTCAGCGTTTTGACAAAAATCTGCATTTT 16938
|||| || || ||||| |||||||||||
Sbjct 2914632 CGTCAAGGTCTTCACAAAGATCTGCATTTT 2914603
Score = 93.3 bits (102), Expect = 3e-14
Identities = 145/207 (70%), Gaps = 8/207 (4%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC----TCCAA 16788
||||| ||||||||||| || ||||||||||| | | ||| |||||| ||||
Sbjct 2917753 TGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGT----GCGTCCATCTTCCAG 2917698
Query 16789 TTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAAT 16848
|| ||||| ||| | || |||| ||| || || ||| | ||| || ||||| ||
Sbjct 2917697 CTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGAT 2917638
Query 16849 TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCC 16908
|| ||| || | | | ||||| | |||||| |||| ||||||||| || ||
Sbjct 2917637 TTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTCCC 2917578
Query 16909 GGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||| || || ||||| ||||||||
Sbjct 2917577 TGTCAGGGTCTTCACAAAGATCTGCAT 2917551
>seq511
Length=1428375
Score = 96.9 bits (106), Expect = 3e-15
Identities = 148/209 (71%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
||||| ||||||||||| || ||||||||||| | || ||| | || |||| ||
Sbjct 1121384 TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGC 1121325
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850
||||| ||| | || || ||||| || || || | |||||| ||||| || ||
Sbjct 1121324 TTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTG 1121265
Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910
|| ||| || | | | ||||||| |||||| || | ||||||||| || || |
Sbjct 1121264 GC--CTTGACATTCTCAATGGTGTCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAG 1121207
Query 16911 TCAGCGTTTTGACAAAAATCTGCATTTTG 16939
|||| || || ||||| |||||||| |||
Sbjct 1121206 TCAGGGTCTTCACAAAGATCTGCATGTTG 1121178
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/205 (71%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
||||| ||||||||||| || ||||||||||||| || ||| | || |||| ||
Sbjct 1121612 TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGC 1121553
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850
||||| ||| | || || ||||| || || || | |||||| ||||| || ||
Sbjct 1121552 TTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTG 1121493
Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910
|| ||| || | | | ||||||| |||||| || | ||||||||| || || |
Sbjct 1121492 GC--CTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAG 1121435
Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935
||| || || ||||| ||||||||
Sbjct 1121434 TCAAGGTCTTCACAAAGATCTGCAT 1121410
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/205 (71%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
||||| ||||||||||| || ||||||||||||| || ||| | || |||| ||
Sbjct 1121840 TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGC 1121781
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850
||||| ||| | || || ||||| || || || | |||||| ||||| || ||
Sbjct 1121780 TTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTG 1121721
Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910
|| ||| || | | | ||||||| |||||| || | ||||||||| || || |
Sbjct 1121720 GC--CTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAG 1121663
Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935
||| || || ||||| ||||||||
Sbjct 1121662 TCAAGGTCTTCACAAAGATCTGCAT 1121638
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/205 (71%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
||||| ||||||||||| || ||||||||||||| || ||| | || |||| ||
Sbjct 1122068 TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGC 1122009
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850
||||| ||| | || || ||||| || || || | |||||| ||||| || ||
Sbjct 1122008 TTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTG 1121949
Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910
|| ||| || | | | ||||||| |||||| || | ||||||||| || || |
Sbjct 1121948 GC--CTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAG 1121891
Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935
||| || || ||||| ||||||||
Sbjct 1121890 TCAAGGTCTTCACAAAGATCTGCAT 1121866
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/205 (71%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
||||| ||||||||||| || ||||||||||||| || ||| | || |||| ||
Sbjct 1122296 TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGC 1122237
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850
||||| ||| | || || ||||| || || || | |||||| ||||| || ||
Sbjct 1122236 TTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTG 1122177
Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910
|| ||| || | | | ||||||| |||||| || | ||||||||| || || |
Sbjct 1122176 GC--CTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAG 1122119
Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935
||| || || ||||| ||||||||
Sbjct 1122118 TCAAGGTCTTCACAAAGATCTGCAT 1122094
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/205 (71%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
||||| ||||||||||| || ||||||||||||| || ||| | || |||| ||
Sbjct 1122524 TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGC 1122465
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850
||||| ||| | || || ||||| || || || | |||||| ||||| || ||
Sbjct 1122464 TTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTG 1122405
Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910
|| ||| || | | | ||||||| |||||| || | ||||||||| || || |
Sbjct 1122404 GC--CTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAG 1122347
Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935
||| || || ||||| ||||||||
Sbjct 1122346 TCAAGGTCTTCACAAAGATCTGCAT 1122322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 403474446895720
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